Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00631 ATGTCATCGAGTGCAAGTGAAACCCTTTGGAGCTATGAAGAAGAGAAGGCATTTGAGAATGCCATCGCCACTCATTGGATTGATGAAGACTCAAAGGAGCAATGGCAGAAGATTGCTTCAGCAGTTCCCAACAAAAGCATGGAGGAAGTGAAGCAACATTACCAATTGCTAGTAGAGGATGTGAGTGCAATAGAGGGAGGGCATATACAACTTCCCAACTATGCAGGAGAGGAAACTACATCTTCAAACAAGGATTCTTCCAAGGCTTCAGCTACAGATAAGAGATCCAATTGTAATTATGGAAGTGGGTTTTCAGGGTTAGGACATGACTCAACTGGTAAAGGAAGCTTGTCAAGGTCTTCAGAACAAGAAAGGCGAAAAGGGATTCCATGGACAGAAGAAGAGCATAGGTTATTTCTACTTGGTCTTGACAAGTTTGGAAAAGGAGATTGGAGAAGCATTTCGAGGAACTTTGTGATTTCTAGGACTCCAACTCAAGTGGCAAGCCATGCTCAAAAGTACTTCATTCGGTTAAACTCAATGAATAGAGATAGAAGGAGGTCTAGTATCCATGACATTACAAGTGTGAACAATGGAGATATGGCTGGAAATCAGGCACCAATTACAGGGCAACATGGcaccacaaacccatccaacgCCATAGCTTTAGGAATAGGACAATCAGTGAAGCATAGAACTCAACCCCCCCATATGGCTCCTGGTTTAGGCATGTATGCCACTCCCATGGGCCATCCGGTTCCTGCTCCGCCGGCCCATATGGCATCTGCTGTTGGAACTCCCGTCATGCTGCCACCTGGGCATCATCCCCCCTATGTTCTCCCACTTGCTTACCCAATGGCTCCACCAACAATGCACCAATA 881 0.4449 MSSSASETLWSYEEEKAFENAIATHWIDEDSKEQWQKIASAVPNKSMEEVKQHYQLLVEDVSAIEGGHIQLPNYAGEETTSSNKDSSKASATDKRSNCNYGSGFSGLGHDSTGKGSLSRSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDMAGNQAPITGQHGTTNPSNAIALGIGQSVKHRTQPPHMAPGLGMYATPMGHPVPAPPAHMASAVGTPVMLPPGHHPPYVLPLAYPMAPPTMHQ 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00631 293 MobiDBLite consensus disorder prediction 73 129 - -
Bva05g00631 293 MobiDBLite consensus disorder prediction 74 118 - -
Bva05g00631 293 ProSiteProfiles Myb-like domain profile. 2 58 IPR001005 -
Bva05g00631 293 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 127 177 IPR006447 GO:0003677
Bva05g00631 293 ProSiteProfiles SANT domain profile. 131 179 IPR017884 -
Bva05g00631 293 SUPERFAMILY Homeodomain-like 125 180 IPR009057 -
Bva05g00631 293 SUPERFAMILY Homeodomain-like 9 63 IPR009057 -
Bva05g00631 293 PANTHER TRANSCRIPTION FACTOR KUA1 6 292 - -
Bva05g00631 293 CDD SANT 130 175 IPR001005 -
Bva05g00631 293 Pfam Myb-like DNA-binding domain 10 56 IPR001005 -
Bva05g00631 293 Pfam Myb-like DNA-binding domain 130 175 IPR001005 -
Bva05g00631 293 ProSiteProfiles Myb-like domain profile. 123 175 IPR001005 -
Bva05g00631 293 Gene3D - 1 71 - -
Bva05g00631 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 123 179 IPR017930 -
Bva05g00631 293 PANTHER TRANSCRIPTION FACTOR MYBS1 6 292 - -
Bva05g00631 293 SMART sant 127 177 IPR001005 -
Bva05g00631 293 SMART sant 6 60 IPR001005 -
Bva05g00631 293 CDD SANT 10 58 IPR001005 -
Bva05g00631 293 Gene3D - 129 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00631 Bva-Chr5 3139534 3140806 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva05g00631 Myb_DNA-binding 2.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00631 - - gmx:778049 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00631 05 3139534 3140806 Bva05g00631 05 3139534 3140806 ECH