Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00623 ATGGATGCACGACGTGTCTCCCGGACAGTGATTGACCCTAAAGTCAGGCGCGTGGGTTTCTTCGCTCCCAGTGCTGCGCAATCGGATGGGGTCGATCCTGTCTCGGTTGATTCGGAGTCTCGACCACTTGCGAACTCTCCGGTCATGATACCACCACGGCGTCATCTTTCTGAGAGAACAGCCGCCGTTCCGGTTCCCGAGACGGGTTCCCGGCGGCAAGCTTCCGGAGATAGTGTTCCAGTTGGAAGTTATAATCCATCGGAGTCCCTGCTTGGAACTTCGCCGGTGGCATCGCCTTCCAGTCACGTTGAGATTCTCGACGGAATATTCTCCGAGGACTCTTCTACCACTGGCTGGTTTCGTCGCAGTACTTCAGGAAAACTTGCTTCTAGTTTTCCAGGGGGAGCTCTTGATTTGGACACCGTGAAACCACCGGAAAATTCTGGTAGTCACTTCAAAGTGGGGATAGATGCGAGAAAGTCCGCTGGTGTCTCTGATAAAAGGGAAGATGTTGCCAAAGAAGTGCATCATGATCTGTCATCAAATTCAAAGCCGCTGAAACAAAAAACCACAAAGGCTGAGAGACGAGCCTTGCAGGAGGCACAACGAGCTGCAAAAGCGGCTTCAAAAGCTGAGGCAGTTACTGAATCTGGTAGAGCAGGCCCCGGTAAAACTAGTAAGCAGtcctaccaaaaaaaagacGGTCCTCCGGCTGCGTCTCCAGTGACTAATGACAAGAAAGCAAGTGATCGTCCTcaggagaaagaaaggaagaaagatacTCTTCCTCCACGAATGCAATTTGATGACAAGAACCGAGTGGAAAAGGCAAAAAGGCGTGCTGTAGTTAATCAAACTGAAGCTAGAAACAGAGTTGAACTATTTCAGCATTTGCCTCAATATGAACATGGAAGTCAGCTTCCTAATCTTGAGTcaaaattttttcaactttattcGGTGCATCCTGCCGTGTTCAAGGTTGGATTGCGTTATTTGGCAGGAGATATATCAGGGGGTAATGCTCGGTGTATTGCGATGCTGAGAGCATTTCAAGAAGCTATTAGAGACTACTCCACTCCACGTGAAAAAACTCTGGCTAGGGATTTAACTGCAAAAATAAGTAGTTATGTCTCTTTTTTCACCGAATGCAGGCCTCTTTCAATCAGCATGGGAAATGCAATTAAGTTTGTGAAGAGTCGTATTGCGAAGTTGCCTTTACATCATTCTGAGTCTGAGGCAAAGGCAGTTCTTTGTTCTGACATTGATCGGttcatcaatgaaaaaattattgtggCTGATAAGGTTATTGTCAGACATGCTGCTACAAAGGTTAGGGATGGAGATGTTCTTCTTACATATGGATCGTCATGTGTTGTTGAGATGATTCTTTTATATGCCCATGAACTTGGGAAACAGTTTCGTGTTGTGGTGGTAGACTCACGACCGAAGCTTGAGGGCCAGGCCTTACTTCGTAGATTGGTGGCCAAGGGCCTGAATTGTACATATACTCATATAAATGCTGTTTCTTATGTGATGCATGAGGTCACCCGAGTTTTTCTTGGAGCTTCTTCGGTTCTGTCTAATGGAACTGTATATTCTAGGATTGGGACTGCAGGTGTTGCTATGGTGGCTCATTCATTTCACGTTCCTGTCTTGATCTGTTGTGAAGcatataaatttcatgaaaGGGTGCAACTTGATTCGATATGTTTCAATGAACTGGGTGACCCTGATGCTCTAGCCAGGGTTCCTGGAAGAATGGGTGTCAATTATCTGGATAACTGGAGAAGTAAAGACAATTTGcaacttttgaatttgatGTATGACGCTACTCCTTCGGATTATGTCTCTATGATAATAACAGATTATGGCATGGTCCCGCCAACGAGTGTGCCCGTAATTGCACGGGAGTATGGCAAAGAGCATTTGTTGATTTA 1937 0.4383 MDARRVSRTVIDPKVRRVGFFAPSAAQSDGVDPVSVDSESRPLANSPVMIPPRRHLSERTAAVPVPETGSRRQASGDSVPVGSYNPSESLLGTSPVASPSSHVEILDGIFSEDSSTTGWFRRSTSGKLASSFPGGALDLDTVKPPENSGSHFKVGIDARKSAGVSDKREDVAKEVHHDLSSNSKPLKQKTTKAERRALQEAQRAAKAASKAEAVTESGRAGPGKTSKQSYQKKDGPPAASPVTNDKKASDRPQEKERKKDTLPPRMQFDDKNRVEKAKRRAVVNQTEARNRVELFQHLPQYEHGSQLPNLESKFFQLYSVHPAVFKVGLRYLAGDISGGNARCIAMLRAFQEAIRDYSTPREKTLARDLTAKISSYVSFFTECRPLSISMGNAIKFVKSRIAKLPLHHSESEAKAVLCSDIDRFINEKIIVADKVIVRHAATKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKLEGQALLRRLVAKGLNCTYTHINAVSYVMHEVTRVFLGASSVLSNGTVYSRIGTAGVAMVAHSFHVPVLICCEAYKFHERVQLDSICFNELGDPDALARVPGRMGVNYLDNWRSKDNLQLLNLMYDATPSDYVSMIITDYGMVPPTSVPVIAREYGKEHLLI 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00623 645 MobiDBLite consensus disorder prediction 22 96 - -
Bva05g00623 645 SUPERFAMILY NagB/RpiA/CoA transferase-like 319 638 IPR037171 -
Bva05g00623 645 MobiDBLite consensus disorder prediction 247 280 - -
Bva05g00623 645 MobiDBLite consensus disorder prediction 71 96 - -
Bva05g00623 645 Gene3D - 431 638 IPR042529 -
Bva05g00623 645 MobiDBLite consensus disorder prediction 160 201 - -
Bva05g00623 645 Pfam Initiation factor 2 subunit family 336 628 IPR000649 GO:0044237
Bva05g00623 645 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 1 645 - -
Bva05g00623 645 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 645 - -
Bva05g00623 645 MobiDBLite consensus disorder prediction 131 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00623 Bva-Chr5 3075822 3079775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00623 1 645 Eukaryotic Initiation Factors Gene Family AT5G38640 59.520 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00623 K03680 - qsu:111996964 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00623 05 3075822 3079775 Bva05g00623 05 3075822 3079775 ECH