Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00612 ATGGCTGGTCATAGAAGAAGGAGGCACCATGTCAGCAGAATACATGCATTCTCTTGTGGGAAAGCCTCATTCCAAGGTGAGCATTCACTTATTGGCGGGCCTGGCTTCTCAAGAATAGTCTATTGCAACGACCCAGAACGTGTTGAGGCTGATATTCTCAGTTATGGTAACAATTACGTCAGAACAACAAAATATACGCTAGCCTCGTTCTTGCCCAAGTCATTGTTTGAGCAATTCAGGAGGGTTGCCAACTTTTACTTCCTCATCTGTgcaattctctctttcttccctGTTTCTCCTTACTCTGCTGTCAGTAATGTAGTCCCACTGGTGGTTGTGGTTGGAGCTACAATGGGCAAAGAGATCCTTGAGGATTGGAGGCGGAAACAGCAGGATATTGAGATGAATAACAGAAAAGTTAAAGTACATCGTGGAGAAGGAGTTTTTGATCATTCCAAATGGAGGGATCTGAGAGTTGGAGATGTAGTAAAGGTGGACAAAGATGAATTTTTTCCTGCTGATCTCATTTTACTTGCATCAAGCTACGATGATGCAATTTGCTATGTTGAGACCATGAATCTCGATGGAGAAACAAATCTTAAACTCAAACAAGCACTGGAAGAGACTTCTAAGTTGAATGAAGATTCAagctttcaaaatttcaagggTATCATCAAATGTGAAGATCCAAATGCAAATTTATACACATTTATTGGCAGTTTGGAGCTTGAAAACCAACAGTACCCTCTTGCGCCTCAGCAGCTACTGCTTAGGGACTCGAAGCTGAGGAACACAGATTTTATCTATGGTGTGGTGATCTTTACAGGTCATGATACAAAGGTTATGCAGAATTCAACAGCGCCTCCTTCCAAGAGAAGCAAAGTTGAGAAAAGGATGGATAAGGTCATCTACTtccttttctctgttttggtttttatttcttttattggatcaattttctttgggaTATCAACAAGTGAGGATCTTCAAAATGGATTAATGAAAAGATGGTACCTTAGACCTGATAAGACCACAATTTACTATGATCCCAAGAGAGCACCAGTTGCAGCACTTCTGAATTTCTTGACTGCACTTATGTTGTACAGTTACTTGATTCCCATTTCCTTGTATGTATCAATAGAAATTGTGAAATTTCTTCAGAGCATTTTCATCAACCAAGATTTGAACATGTATTATGAGGAAACAGACAAGCCAGCACATGCTCGTACCTCAAATTTGAACGAAGAACTTGGCCAAGTGGAGACCATACTTTCTGATAAAACTGGAACTTTAACTTGTAACTCTATGGAATTTATCAAGTGTTCCATTGCTGGGGTTTCTTATGGACGAGGAGTTACAGAAGTTGAGAGAGCTATAGCTAGAAGAAAAGGATCACCTTTACATCAGGAGTTGACAGAAGAAGATGTACATGCTGAGATTGCTGGAGGAAAGCCATCCATTAAAGGCTTTAACTTTGTGGATGAAAGGATTATGAATGGAAATTGGGTCCATGAGCCTCATGCAGATGTAATTCAGAACTTCCTAAGGGTGCTGGCTATATGCCATACTGCAATACCTGAGGTTGATGAAGAAACTGGTATTTCATATGAAGCTGAATCACCAGATGAGGCTGCTTTTGTGATTGCAGCTAGAGAACTTGGGTTTGAGTTTTATGAAAGGACACAGACAACCATCTCATTGCGTGAGTTAGATCCTGCATCTATGATCAAGGCTAAAAGGACCTACAAACTCTTAAACGTGATAGAGTTTAGCAGTGCAAGAAAGCGGATGTCTGTAATTATAAGAGATGAGGAGGGTCGTCTACTCCTACTTTGCAAAGGAGCTGACAGTGTCATGTTTGAAAGACTTGCTAAGAATGGAAGAGAGTTTGAAGAGAAGACTAAGGAGCATATCAATGAGTATGCTGATGCTGGTTTGAGGACTCTGTTACTTGCATATCGTGAACTTGAAGAGGAAGAGtacaatcaatttaataaagaatTCAATGAAGCCAAGAACTTAGTGAGTGCAGATCGAGAGCAGATTGTAGAGGAAATAGCAGAAAAGGTGGAGAAGGATTTGATTCTTCTTGGTGCTACTGCAGTAGAAGACAAACTTCAAAATGGGGTTCCTGAATGCATTGACAAGCTAGCACAGGCTGGAATTAAGCTATGGGTTTTGACTGGTGATAAAATGGAGACGGCAATCAATATTGgATTTGCTTGTAGTTTACTTAGACAAGGAATGaagcaaattataattagcTCAGACACTCCAGAAATTAAATCACTGGAGAAAGGGGAGGACAAGTCTGCTGCTGCAGTGGCAATTAAAGCAAGTGTTCTTCGCCAGATAAAGGAGGGAATGGAATCACTTACTACATCAGATGAAAATTCTGAGGCATTAGCTCTGATCATTGATGGGAACTCTCTCACTTATGCACTACAAGATGATGCCAAGGACATGTTTCTTGAACTCACCATTGGCTGTGCATCTGTCATATGCTGCCGTTCATCTCCCAAACAGAAAGCACTTGTTACAAGGCTGGTTAAAACTAACACTGGTAATACAACTCTAGCAATCGGTGATGGGGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATTGGAATTGGTATCAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCAAGTGACATTGCGATTGCCCAATTTCGGTTTCTAGAGCGCTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGGATCTCATCAATGATTTGCTATTTCTTTTACAAGAACATTGCCTTCGGCTtcactcttttcttctttgagaTGTATGCATCATTCTCGGGACAAGCAGCCTACAATGATTGGTTTCTCTCACTATACAACGTATTCTTCACTTCACTTCCTGTGATCGCCTTAGGAGTGTTTGACCAGGATGTTTCTGCTAAATTATGTCTCAAGTTCCCACTATTATATCAAGAAGGCGTGCAAAATGTGTTATTCAGTTGGAAAAGAATCCTTGGCTGGGCATTCAATGGGGTACTGAGTGCTACCATGATATTCTTCCTCTGCATTGGAGCTATGGAGCATCAAGCATTCCGAAAAGGTGGTGAAGTTGTGGGGCTAGAAGAACTTGGTGCCACCATGTATACTTGTGTTGTGTGGGTGGTGAATTGTCAAATGGCACTGTCTGTTAGTTATTTCACATATATACAGCATGTATTCATCTGGGGTGGCATTCTCTTCTGGTATATATTCCTCTTGGCATATGGAGCCATGGACCCTTCCATTTCAACAACGGCCTACAAGGTCTTCATAGAAGCTTGCGCTCCAGCGCCATCTTACTGGCTCGTCACTTTGCTGGTTCTTGTTGCAACTCTTCTTCCATATTTCACCTATGCTTCAGTACAGATGAGGTTTTTCCCCATGTTTCATCAAATGATACAGTGGATAAGAAAGGATGGCCAAACAGATGACCCTGAATACTGCAATGTGGTGAGGCAGAGATCAATAAAACACACAACAGTTGGCTTCACAGCCCGCTTTGAAGCTTCTAAACACTTTGAAGACACTAGTGAGACTCATTA 3578 0.3983 MAGHRRRRHHVSRIHAFSCGKASFQGEHSLIGGPGFSRIVYCNDPERVEADILSYGNNYVRTTKYTLASFLPKSLFEQFRRVANFYFLICAILSFFPVSPYSAVSNVVPLVVVVGATMGKEILEDWRRKQQDIEMNNRKVKVHRGEGVFDHSKWRDLRVGDVVKVDKDEFFPADLILLASSYDDAICYVETMNLDGETNLKLKQALEETSKLNEDSSFQNFKGIIKCEDPNANLYTFIGSLELENQQYPLAPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVMQNSTAPPSKRSKVEKRMDKVIYFLFSVLVFISFIGSIFFGISTSEDLQNGLMKRWYLRPDKTTIYYDPKRAPVAALLNFLTALMLYSYLIPISLYVSIEIVKFLQSIFINQDLNMYYEETDKPAHARTSNLNEELGQVETILSDKTGTLTCNSMEFIKCSIAGVSYGRGVTEVERAIARRKGSPLHQELTEEDVHAEIAGGKPSIKGFNFVDERIMNGNWVHEPHADVIQNFLRVLAICHTAIPEVDEETGISYEAESPDEAAFVIAARELGFEFYERTQTTISLRELDPASMIKAKRTYKLLNVIEFSSARKRMSVIIRDEEGRLLLLCKGADSVMFERLAKNGREFEEKTKEHINEYADAGLRTLLLAYRELEEEEYNQFNKEFNEAKNLVSADREQIVEEIAEKVEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPEIKSLEKGEDKSAAAVAIKASVLRQIKEGMESLTTSDENSEALALIIDGNSLTYALQDDAKDMFLELTIGCASVICCRSSPKQKALVTRLVKTNTGNTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEMYASFSGQAAYNDWFLSLYNVFFTSLPVIALGVFDQDVSAKLCLKFPLLYQEGVQNVLFSWKRILGWAFNGVLSATMIFFLCIGAMEHQAFRKGGEVVGLEELGATMYTCVVWVVNCQMALSVSYFTYIQHVFIWGGILFWYIFLLAYGAMDPSISTTAYKVFIEACAPAPSYWLVTLLVLVATLLPYFTYASVQMRFFPMFHQMIQWIRKDGQTDDPEYCNVVRQRSIKHTTVGFTARFEASKHFEDTSETH 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00612 1192 Pfam Phospholipid-translocating P-type ATPase C-terminal 889 1139 IPR032630 -
Bva05g00612 1192 CDD P-type_ATPase_APLT_Dnf-like 57 1021 - -
Bva05g00612 1192 SUPERFAMILY Calcium ATPase, transduction domain A 137 284 IPR008250 -
Bva05g00612 1192 SUPERFAMILY HAD-like 419 916 IPR036412 -
Bva05g00612 1192 SUPERFAMILY Calcium ATPase, transmembrane domain M 46 1139 IPR023298 -
Bva05g00612 1192 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Bva05g00612 1192 Gene3D - 698 901 IPR023214 -
Bva05g00612 1192 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1146 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Bva05g00612 1192 PRINTS P-type cation-transporting ATPase superfamily signature 861 880 - -
Bva05g00612 1192 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Bva05g00612 1192 PRINTS P-type cation-transporting ATPase superfamily signature 747 757 - -
Bva05g00612 1192 Gene3D - 543 697 IPR023299 GO:0000166
Bva05g00612 1192 Gene3D - 120 286 - -
Bva05g00612 1192 SFLD p-type atpase 406 912 IPR044492 -
Bva05g00612 1192 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1185 - -
Bva05g00612 1192 SFLD C1.7: P-type atpase like 406 912 - -
Bva05g00612 1192 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 497 699 IPR023299 GO:0000166
Bva05g00612 1192 Pfam Cation transport ATPase (P-type) 520 623 - -
Bva05g00612 1192 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 828 944 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva05g00612 1192 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1185 - -
Bva05g00612 1192 Coils Coil 654 674 - -
Bva05g00612 1192 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00612 Bva-Chr5 3028173 3033983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00612 10 1190 Primary Pumps ATPases AT1G68710 69.637 0.0 1798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00612 K01530 K14802 gmx:100797039 1969.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01087 06 8761400 8767372 Bva05g00612 05 3028173 3033983 ECH
Bva05g00612 05 3028173 3033983 Bva05g00612 05 3028173 3033983 ECH