Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00609 ATGGCAAAACTAGGTATGGAGATGGTTCCCCAAGCTTCAGCAGCTACCAGACCTTCCCTTCCAACTCTTTTAAAGGAATCCCCCGGAGTCCAAGTCAAAGCCTCCGGTAAACCTCAACATAGACGTGCTTGTATGTCATTACCAACCTCAACCACCATCTCACTCTTGGCTCTTTTCGCGCCTCCCCCTGAAGCGAAAGCTTTCAGCATTGCCAAGGACCAGATTGTCTCTTCTCTCACTGAAGTAGAGAAAACGATCGATCAGGTTCAGGAGGTGGGTTCAAGTATCCTGGATACGACCCAGCATGTTCTTAATGTTATCGGGAATGCTTTGAAGCCCGGCATCGACGCCGCGTCACCGCTTATGCGGCAGGCCGGAGAACAAGCCTTGAAAGTAGTTTCCCCAGCCATCTCCGAGGCGTCCAAAAAGGCCCAAGAAGCACTTCAAGGGTCTGGTGTTGATACCGAGAGTGTTGTCACTGCTGCTAAGACGGTAGCAGGTGTTGCACAGCAAACAACCAAGGTAATTGAAGGTGCCAAGCCAATAGCTTCATCAACAGTTGAAACCATATCTTCTGCAGATCCTACTGTGATAGCAGGAACAGCTGGGGCACTATTTCTTGCATATCTCCTTTTTCCTCCTATATGGTCTGTCATATCCTTCAACCTTCGTGGTTACAAAGGTGAACTCACTCCTGCTCAAACCCTTGATCTCTTATGTACACAAAACTACGTTCTGATTGATATTAGGTCTGAGAAGGATAAGGACAAGACTGGTATCCCTCGTCTCCCCTCTAGTGTTAAAAACAAGATGATTGCCATTCCTTTGGAAGAGCTACCAAGCAAGCTGAGAGGGCTGGTcaaaaatgtaaagaaagtGGAAGCTGAAATAGCAGCTATGAAGATTTCATATCTCAAGAAAATCAACAAAGACACCAAAATTGTGATTTTGGACTCGTACTCGGACTCGGCAAAAATAGTGGCAAGAACCTTAACCAGCCTTGGTTTCAAGAACAGTTGGATTGTTGCTGATGGGTTTTCTGGAGGAAGAGGGTGGATACAGAGTAGACTAGGAAtagattcttataatttttcatttgcagAGGTGATCTCACCGTCGAGACTCATCCCCGCGGCAGGGACACGTTTTGGTACAACTAGTGCAAAACTACTTCCTGGGGCTGactg 1187 0.4558 MAKLGMEMVPQASAATRPSLPTLLKESPGVQVKASGKPQHRRACMSLPTSTTISLLALFAPPPEAKAFSIAKDQIVSSLTEVEKTIDQVQEVGSSILDTTQHVLNVIGNALKPGIDAASPLMRQAGEQALKVVSPAISEASKKAQEALQGSGVDTESVVTAAKTVAGVAQQTTKVIEGAKPIASSTVETISSADPTVIAGTAGALFLAYLLFPPIWSVISFNLRGYKGELTPAQTLDLLCTQNYVLIDIRSEKDKDKTGIPRLPSSVKNKMIAIPLEELPSKLRGLVKNVKKVEAEIAAMKISYLKKINKDTKIVILDSYSDSAKIVARTLTSLGFKNSWIVADGFSGGRGWIQSRLGIDSYNFSFAEVISPSRLIPAAGTRFGTTSAKLLPGAD 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00609 395 PANTHER CALCIUM SENSING RECEPTOR, CHLOROPLASTIC 25 388 - -
Bva05g00609 395 CDD RHOD 234 348 - -
Bva05g00609 395 Gene3D - 227 366 IPR036873 -
Bva05g00609 395 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 25 388 IPR044690 GO:0009704|GO:0071277|GO:0090333
Bva05g00609 395 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 206 348 IPR036873 -
Bva05g00609 395 SMART rhod_4 230 358 IPR001763 -
Bva05g00609 395 ProSiteProfiles Rhodanese domain profile. 240 361 IPR001763 -
Bva05g00609 395 Pfam Rhodanese-like domain 236 347 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00609 Bva-Chr5 3014129 3016879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00609 41 319 Sulfurtransferasese or Rhodanese AT5G23060 71.174 2.03e-143 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00609 - - gmx:100813363 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00609 05 3014129 3016879 Bva05g00609 05 3014129 3016879 ECH