Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00601 ATGGGGTGTACATTTTCTGGATTGAATGCATTATACGACGCCGTTAATGGAGGTGGTGATGTCTGGATTAATGATAATCGCTTCCGCGTCGTGAGGCAGCTCGGAGAAGGTGGCTTCGCCTATGTCTACTTGGTCAAGGAGGTAACTGCTGACACCTCCTCAGCCTCTGGCGGTGGTCTCGCTAAGAAGCTCAAAGACTCCTCTCATATCTCTGACGATGGAACTTATGCTATGAAAAAGGTCCTTATTCAGAACAATGAACAGTTGGAGTTGGTGAAGGAGGAGATCCGTGTTTCATCACTATTCAGTCACCCCAATCTGCTTCCACTTCTTGATCATGCAGTCATTTCTGTTAAGTCTACCCCTGAAACATCTTGGAGCCATGAAGCATACTTGATATTTCCAGTTCATTTGGATGGAACTTTGCTAGACAATGCTAAAGCCATGAAAGCCAAGAAAGAGCTCTATTCTACGTCAGATGTTCTTCAAATATTTCGGCAGCTCTGTGCAGGACTCAAGCATATGCACAGTTTAGATCCTCCACATGCACATAATGATGTCAAACCTGGTAATGTTCTCATAACACATAGGAAGGGACAACCACCTCTGGCCATACTGATGGATTTTGGCAGTGCTCGACCTGCCAGGCGACAAATTCGCTCACGAGCAGAGGCGCTACAGTTACAGGAATGGGCATCTGAGCATTGCTCCGCTCCTTTCCGAGCCCCCGAACTGTGGGACTGCCCAAGTCACGCTGATATAGATGAGAGGACTGATatttggtcacttggatgcaCTTTGTATGCGATTATGTATGGAGTATCTCCATTTGAATACGCCCTTGGAGAATCTGGAGGAAGCCTGCAATTAGCCGTTCTAAATGCTCAGGTCAAATGGCCAGGTGGACCTAAGCCTCCATATCCGGAAGCTCTTCATCAATTTGTGACGTGGATGCTTCAGCCACAGCCCACTGTGAGGCCACGGATAGATGATATCATAatccatgttgacaagttgaTCGCAAAGTTTTCTCCTTG 1037 0.4532 MGCTFSGLNALYDAVNGGGDVWINDNRFRVVRQLGEGGFAYVYLVKEVTADTSSASGGGLAKKLKDSSHISDDGTYAMKKVLIQNNEQLELVKEEIRVSSLFSHPNLLPLLDHAVISVKSTPETSWSHEAYLIFPVHLDGTLLDNAKAMKAKKELYSTSDVLQIFRQLCAGLKHMHSLDPPHAHNDVKPGNVLITHRKGQPPLAILMDFGSARPARRQIRSRAEALQLQEWASEHCSAPFRAPELWDCPSHADIDERTDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAVLNAQVKWPGGPKPPYPEALHQFVTWMLQPQPTVRPRIDDIIIHVDKLIAKFSP 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00601 345 ProSiteProfiles Protein kinase domain profile. 28 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00601 345 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 344 - -
Bva05g00601 345 Gene3D Transferase(Phosphotransferase) domain 1 16 344 - -
Bva05g00601 345 ProSitePatterns Protein kinases ATP-binding region signature. 34 63 IPR017441 GO:0005524
Bva05g00601 345 CDD STKc_16 27 341 - -
Bva05g00601 345 PANTHER PHOSPHORYLASE KINASE, GAMMA CATALYTIC SUBUNIT-RELATED 1 344 - -
Bva05g00601 345 SUPERFAMILY Protein kinase-like (PK-like) 20 335 IPR011009 -
Bva05g00601 345 Pfam Protein kinase domain 68 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00601 345 SMART serkin_6 28 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00601 Bva-Chr5 2983883 2987465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00601 33 335 EF-hand Containing Proteins AT4G04710 25.243 2.94e-15 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Bva05g00601 Pkinase 7.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00601 K08856 - egr:104421163 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00601 05 2983883 2987465 Bva05g00601 05 2983883 2987465 ECH