Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00595 atgGAGAGCAATAAGGCTGAGGAAATCCGTGAACCAGCTTACACAACCTCAATCCATCACCTTCAAAATATGTATCCTACCCAGAAACCCATCTTTACTTCAAGCCTCACCAACATGGAAACAGGGGAAGGGTCTGAAGGATACCATGTTTTGCCTCATTCTCATCTGGATTCATCTCAAGCTCTACGTTGTATTCCATTTTACTACTCCCAACTGCACTCTTCTAATTCTCCAATCCAAATCTCTGGTCAGAGATTTTCTCCAAAAACATCATCGCAGAGTGACAACAGCAATTTTGATGAAGCAAAGCTGCTTCTTGATGACCgcaagaagaaaaggatgaaTTCCAACAGAGAATCTGCTCGCAGGTCACGAATGCGGAAGAAGCAACAAATAGAAGCCCTTCAATATCAAGTTGAAAATCTGCAGACCATGAATCATCAACTCTCCCAGAAGATCGTTTACCTGTTGGAATGCAACCAACAAATACTACAACAGAACGCACAACTGAAAGAGAGAGTTTCTTCCCTTCAACTAGCCCTCTCTGAATTGTTAGTTCCTCTGGCACCTGTTGAGGAAGCTAGTCACATCTCCAGTGGCCTCATGGCCGAGCCTTCAGCTCGACCAGTCACTACTTCCAGAGTATA 647 0.4266 MESNKAEEIREPAYTTSIHHLQNMYPTQKPIFTSSLTNMETGEGSEGYHVLPHSHLDSSQALRCIPFYYSQLHSSNSPIQISGQRFSPKTSSQSDNSNFDEAKLLLDDRKKKRMNSNRESARRSRMRKKQQIEALQYQVENLQTMNHQLSQKIVYLLECNQQILQQNAQLKERVSSLQLALSELLVPLAPVEEASHISSGLMAEPSARPVTTSRV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00595 215 SMART brlzneu 105 169 IPR004827 GO:0003700|GO:0006355
Bva05g00595 215 Coils Coil 125 152 - -
Bva05g00595 215 Pfam bZIP transcription factor 109 167 IPR004827 GO:0003700|GO:0006355
Bva05g00595 215 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 208 IPR044521 -
Bva05g00595 215 SUPERFAMILY Leucine zipper domain 109 160 IPR046347 GO:0003700|GO:0006355
Bva05g00595 215 MobiDBLite consensus disorder prediction 104 128 - -
Bva05g00595 215 MobiDBLite consensus disorder prediction 80 99 - -
Bva05g00595 215 PANTHER BASIC LEUCINE-ZIPPER 70-RELATED 1 208 - -
Bva05g00595 215 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 112 127 IPR004827 GO:0003700|GO:0006355
Bva05g00595 215 Coils Coil 160 180 - -
Bva05g00595 215 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 107 170 IPR004827 GO:0003700|GO:0006355
Bva05g00595 215 CDD bZIP_plant_GBF1 110 158 IPR045314 GO:0003700|GO:0006355
Bva05g00595 215 Gene3D - 108 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00595 Bva-Chr5 2969067 2969740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00595 99 212 bZIP Transcription Factor Family AT5G60830 51.695 8.43e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva05g00595 bZIP_1 8.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00595 - - aprc:113874797 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01108 06 8852564 8853214 Bva05g00595 05 2969067 2969740 BWGD
Bva05g00595 05 2969067 2969740 Bva05g00595 05 2969067 2969740 ECH