Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00590 ATGGAGCTTCCTCAAGCACGTCCACAAGCTGGAAGGCAGCCGACGCATGACTTTCTGTCACTGTACGGTCATTCAACTGCCCAACAAGATCCATGGCCACCTTCTCAAGGAAATTACCTGAAAACGCATGATTTCCTGCAGCCACTGGAAGGGGTAGAAACGACTCGGACTCGGACTCCGGCCAAGGCAGCAATATCTTGTGTTGAGCACGTCCTACCCGGAGGCATTGGGTGTCACATTTCATTCTCTAATAATGAGAGAGCTCCAAAGCCGGAGGCAATCGTGCAGCCTCAACTAATGGCTATGGACAGAAATGATGATCATTCCAACTGCAGCTCTTATACCGGAGGAAGTGGCTTCACTTTGTGGGAAGATTCGGGAAAGACAGGTAAAGAGAATGCGGTTGACGAACCTCTCTCGGCCGGATCGGCGGCGAGGGTAGGGCAATGGGCGTTGTCGGAGCAGTCGTTTTCGTACAATCGTCACAATAGCTTCAAtgctctctcttcttctcgGTCTCAGACAAATGTTCGCGAGAGGCAGAGTTTTATGGAAATGATCAAATCTGCAAAGGATTGTCCCCGGGACGACGAATTTGACAATGAAGAAGCATTAGTTCTCAAGAAAGAACCCTCCAACACTCCGCCACCAGGGGATTTGAGAGTGAAAGTAGACGGGAAGGGCCCCGACCAAAAGCCAAGCACACCACGATCTAAACATTCTGCGACAGAGCAGCGTAGAAGGAGCAAAATTAATGACAGATTCCAGATGTTAAGAGAAATTATTCCTCATGATGACCAGAAGAGGGATAAAGCATCTTTTTTGTTAGAGGTCATTGAGTATATTCACTTTTTACAAGAGAAGGTGCATAAGTATGAAGGGCGGAATCAAGAACCTGCAAAGTTGATGCCGTGGAGAAATAATCAGAGACCTGCAGAAAGTTATGCTGATCGATCCCGTGACACAAATAGTGGGGCAAGTCGTTCTCCAAAGTTGCTGTCTGCTTCCAagattgatgaaaaaaattttgcCATCTCCCCAGCAATTCCTGGGAGCGCCCAGAACTTGGAATCTGACATGAGCACTGCAACTACCATTAGGCCAATGGATCAACATCCTGGAATAACAAATAAGGCTATGCCAAGTCCCATCCCTTCGCAGCCGAATTTCTTCACTCCAGCTAAAACTGGTGGAGTAGCGTCACAACTCACGCACAGATTGGTAGCCGATGCAGAAAACAGCACACATCAACCTTCAGTGCAATGTCAAACTTACTCTTGTGCTTCTGATAAGCTGAAAGAGAAAGATCTCACCGTTGAAGGTGGAGCCATTAGCATATCAAGCGTTTACTCAAAAGGGTTGTTGGACACATTAACACATGCACTGCAGAGCTCAGGAGTGGAATTGTCGCAGGCTAGTATCTCAGTGCAAATTGAACTTGGTAAACAAGGAAACATCAGACCAGCGAGAGCAACACCTAGTGATAAGGATGATGAGATTCTTTCTAGCAAACAAGGGGTGATACGTCCTAGAGTTTCCGGCGTCGAGGACTCTGATAAAGCAGTAAAGAAGGGTAGCTTCTATACAAGAATGTG 1595 0.4602 MELPQARPQAGRQPTHDFLSLYGHSTAQQDPWPPSQGNYLKTHDFLQPLEGVETTRTRTPAKAAISCVEHVLPGGIGCHISFSNNERAPKPEAIVQPQLMAMDRNDDHSNCSSYTGGSGFTLWEDSGKTGKENAVDEPLSAGSAARVGQWALSEQSFSYNRHNSFNALSSSRSQTNVRERQSFMEMIKSAKDCPRDDEFDNEEALVLKKEPSNTPPPGDLRVKVDGKGPDQKPSTPRSKHSATEQRRRSKINDRFQMLREIIPHDDQKRDKASFLLEVIEYIHFLQEKVHKYEGRNQEPAKLMPWRNNQRPAESYADRSRDTNSGASRSPKLLSASKIDEKNFAISPAIPGSAQNLESDMSTATTIRPMDQHPGITNKAMPSPIPSQPNFFTPAKTGGVASQLTHRLVADAENSTHQPSVQCQTYSCASDKLKEKDLTVEGGAISISSVYSKGLLDTLTHALQSSGVELSQASISVQIELGKQGNIRPARATPSDKDDEILSSKQGVIRPRVSGVEDSDKAVKKGSFYTRM 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00590 531 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 524 IPR044295 GO:0003700|GO:0006351|GO:0046983
Bva05g00590 531 PANTHER TRANSCRIPTION FACTOR BIM1 1 524 - -
Bva05g00590 531 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 233 299 IPR036638 GO:0046983
Bva05g00590 531 SMART finulus 241 291 IPR011598 GO:0046983
Bva05g00590 531 MobiDBLite consensus disorder prediction 206 252 - -
Bva05g00590 531 MobiDBLite consensus disorder prediction 300 334 - -
Bva05g00590 531 CDD bHLH_AtBIM_like 234 306 - -
Bva05g00590 531 Pfam Helix-loop-helix DNA-binding domain 237 286 IPR011598 GO:0046983
Bva05g00590 531 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 235 285 IPR011598 GO:0046983
Bva05g00590 531 MobiDBLite consensus disorder prediction 223 252 - -
Bva05g00590 531 Gene3D - 233 306 IPR036638 GO:0046983
Bva05g00590 531 MobiDBLite consensus disorder prediction 486 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00590 Bva-Chr5 2929576 2936465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00590 1 520 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 43.182 3.22e-102 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva05g00590 HLH 4.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00590 - - gmx:100808016 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00590 05 2929576 2936465 Bva05g00590 05 2929576 2936465 ECH