Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00576 ATGGAATTTGACAGTGGCAAACAGCAGCAAAACTACGTGATTCCACAGCTGAAGCTCGTTGCTTCAATCGTTCTGTGTTTCATTCTATTATCCCCTGCAGAGGCATTCGATCCATTGGATCCAACAGGGAACGTGACAATAAGATGGGATATTATGTCCTGGACAGCAGATGGTTATTTGGCCACTGTGACAATATTCAACTTGCAAGCATACCGGAATATAATATACCCTGGGTGGACTCTAGGGTGGACATGggcaaaaaaagaagtgatcATGACGATGGTGGGAGCTCAAGCTACAGAACAAGGAGATTGCTCAAAGTTCAAGTTGGCAATTCCTCATAGCTGCAAGAGGAACCCTGAAGTGGTTGATTTGATGCCTGGAGCTCCCTACAATATGCAATATACTAACTGCTGCAGAGGGGGTGTCTTAGCATCTTGGACCCAGGATCCTACAACTGCAGTCTCAGCATTTCAGATGGCTGTGGGGAAATCTGGCACCTCCAATAAGACAGTTAAATTGCCCAATAACTATAAATTGCTAGGACCAGGACCAGGGTATAGTTGTGGCCCTGCAAAACTTGTGCGAGCCACTGTCTACCCTACAACAGATCATAGGCGAAAATCTCAAGCACTGATGTCATGGAATGTGACATGCACTTATTCTCAGTTTCTTGCTTCCAAGAACCCAAGTTGCTgcgtttctttctcttctttctacAGTGATACCATCACGGGTTGCCCAACTTGTGCTTGTGGTTGCCAGAATAATGACACCTGTGTGAAGAGCGACTCAAAGTTACTGAAACTACCCGAAATACTAAACAATACCAAGAAGGATAACATACCGACGACACCATTGTTACAATGCACACACCACATGTGCCATGTCCGGATTCATTGGCATGTGAAAGTCAACTACAAGGACTATTGGCGGGTCAAGATTGCCATCATCAACTTCAACTACAGGCAGAATTATACAGACTGGACTCTCGTTGTGCAGCATCCAAATCTCAACAATGTCACCCAAGTCTATAGCTTTGAATATAAGCCAGTTCTTCCTTATGATTCCATAAATGACACAGCCATGTTCTATGGATTGAAATACTACAACGATCTATTGATGCAAGCAGGACCTCAGGGGAATGTTCAATCTGAGGTGCTTatgaagaaggacaaaaacaCATTTACGCTCAAGCAGGGATGGGCATTTCCCAGAAGGGTCTACTTTAATGGCGAGGAGTGCATGCTACCACCTCCTGACTCTTATCCTTTCTTGCCAAATTCTGCTCATCAGCtaccaataaatatttcaatcatGACAGCCTGTATAATTCTTATGTTATTTTCCATAtggtg 1358 0.4161 MEFDSGKQQQNYVIPQLKLVASIVLCFILLSPAEAFDPLDPTGNVTIRWDIMSWTADGYLATVTIFNLQAYRNIIYPGWTLGWTWAKKEVIMTMVGAQATEQGDCSKFKLAIPHSCKRNPEVVDLMPGAPYNMQYTNCCRGGVLASWTQDPTTAVSAFQMAVGKSGTSNKTVKLPNNYKLLGPGPGYSCGPAKLVRATVYPTTDHRRKSQALMSWNVTCTYSQFLASKNPSCCVSFSSFYSDTITGCPTCACGCQNNDTCVKSDSKLLKLPEILNNTKKDNIPTTPLLQCTHHMCHVRIHWHVKVNYKDYWRVKIAIINFNYRQNYTDWTLVVQHPNLNNVTQVYSFEYKPVLPYDSINDTAMFYGLKYYNDLLMQAGPQGNVQSEVLMKKDKNTFTLKQGWAFPRRVYFNGEECMLPPPDSYPFLPNSAHQLPINISIMTACIILMLFSIW 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00576 452 PANTHER COBRA-LIKE PROTEIN 1 449 - -
Bva05g00576 452 PIRSF COBRA 10 452 IPR006918 GO:0010215|GO:0031225
Bva05g00576 452 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0031225
Bva05g00576 452 PANTHER PROTEIN COBRA 1 449 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00576 Bva-Chr5 2854372 2856396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00576 17 449 COBRA Gene Family AT3G02210 60.502 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00576 - - gmx:100813134 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00576 05 2854372 2856396 Bva05g00576 05 2854372 2856396 ECH