Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00575 ATGAAGTATCCATGGTCCTCCATAACTGGATCTGTTGCCCATAGCAGAGGCTTCGccattttacttgttttatgGCTCTCTTGCTGCACATTCACTTCTACAGAAGCATATGATGCAGTTGATCCATCTGGGAATATAACTATTAAATGGGATGTCATCAGCTGGACTCCGGATGGATATGTTGCTGTTGTTACAATTTACAACTTTCAACAGTATCGCCGTATTCAGGCACCGGGGTGGACATTGGGCTGGGTATGGGCTAAAAAGGAAGTGATTTGGAGCATGATGGGAAGCCAAACCACAGAACAGGGGGATTGTTCAAAGTACAAAGGGAACGTCCCACATTGCTGTAAGAAGGATCCAACAGTAGTTGATTTACTGCCTGGAACTCCTTACAACCAGCAGATTGCAAATTGCTGCAAAGGGGGAATCTTAAATTCATGGGGTCGGGATCCAGCTGCTGCAGTAAGTTCATTTCAGGTTAGCGTGGGTGCCGCAGGGAACACTAACAAAACTCTCAAGTTGCCAAGAAATTTCACCCTCAAAGCGCCAGGGCCTGGATATACTTGTGGTCCTGCAAAGATTGTGAGGCCAACTAAATTTAGTACCAGTGACAAAAGGAGAACCACTCAAGCATTGATGACCTGGAACGTGACCTGCACATATTCTTA 671 0.4471 MKYPWSSITGSVAHSRGFAILLVLWLSCCTFTSTEAYDAVDPSGNITIKWDVISWTPDGYVAVVTIYNFQQYRRIQAPGWTLGWVWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGILNSWGRDPAAAVSSFQVSVGAAGNTNKTLKLPRNFTLKAPGPGYTCGPAKIVRPTKFSTSDKRRTTQALMTWNVTCTYS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00575 223 PANTHER COBRA-LIKE PROTEIN 11 223 - -
Bva05g00575 223 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Bva05g00575 223 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0031225
Bva05g00575 223 PANTHER PROTEIN COBRA 11 223 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00575 Bva-Chr5 2849936 2860326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00575 18 223 COBRA Gene Family AT3G02210 73.786 1.53e-116 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00575 - - tcc:18604865 400.208