Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00574 ATGGAGCGTCTATGGTCTTCCATAACTGGAACAGCCCATGGTAGTGGCTTCAacgttttttttgttttgttgctcTCCTGCTGCGCTTTCACTTCCACAGCAGCCTACGATGCACTCGATCCAACTGGCAATATAACAATCAAATGGGATGTCATGAACTGGACTCGTGATGGATATGTTGTAAGTGATCAATACTTTCTTATTGTCATAGGCTGTTGTTACCATGTACAACTTTCAACAGTATCGCCATATTCAGGCACCAGGTGGACATTGGGGTGGGTATGGGCTAAAAAGGAAGTGATTTGGAGCATGATGGGAGGCCAAACCACAGAACAAGGGGATTGTTCAAAGTATAAAGGGAACGTCCCACATTGTTGTAAGAAGGATCCAACAGTAGTTGATTTACCGCCTGGAACTCCTTACAACCAGCAGATTGCAAATTGCTGCAAAGGGGGAGTCTTAAATTCATGGGGTCAGGACCCAGCTACTGCAGTAAGTTCATTTCAGGTTAGTGTGGGTGCCGCAGGAAACACTAACAAAACTGTCAAGTTGACAAGAAATTTCACCCTCAAAGCGCCAGGGCCTGGATATACTTGTGGTCCTGCAAAGATTGTGAGGCCAACTAAATTTAGTACCAGTGACAAAAGGAGAACCACTCAAGCATTGAGCTCACCATATCTAACTTCAGCGCTATCATCTCCACGAAAACCTGTAAATATACCTCAACTCCAATGGACTAACCATATGTGTCCGGTAGGAGTGCATTGGCATGTGGAGCTCAATTCTAAGGATTACTGGAGAGTAAAGATCACGATCACAAATTTCAATTACAGAATGAAATATACACAATGGTATCTTGTCATTCAGCAACCCAATTTGGATAGTCTAACCCAGCTTTCCAGTTTCAATTACAAGTCACTTAATCTTTCTGAGGGCTTAAATAATACTGGAATACTCTGGGGAGTAAAGTTTTATAACGATTTACTTAGCCAAGCTGGACCCTTTGGAAATGTAGAATCAGAACTCATATTTAGAAAGGACAACTCAACCTTAACATATGATAAAGGGTGGGCCTTCCCACgaagaattaatttcaatGGGGATAACTGTGTTATGCCACCTCCAGATTCCTACCCATGTATACCAAATGCAAGTTCGAACCTTGTATTCTCTCTACTAACTACAGTCATAGCTAGCTTTGCGTCTTTGATTTTCAAAGCTGAACGCAATGGCGTCCTTCATATTGTCATAGGAACTGCAACTGAAGCTAGTGCTCACGGGTGCGCTAAACGTTTGCCTCGTCTTGTTAAAGTGTTCTTTGTTTTCGGGGATTG 1334 0.4175 MMGGQTTEQGDCSKYKGNVPHCCKKDPTVVDLPPGTPYNQQIANCCKGGVLNSWGQDPATAVSSFQVSVGAAGNTNKTVKLTRNFTLKAPGPGYTCGPAKIVRPTKFSTSDKRRTTQALSSPYLTSALSSPRKPVNIPQLQWTNHMCPVGVHWHVELNSKDYWRVKITITNFNYRMKYTQWYLVIQQPNLDSLTQLSSFNYKSLNLSEGLNNTGILWGVKFYNDLLSQAGPFGNVESELIFRKDNSTLTYDKGWAFPRRINFNGDNCVMPPPDSYPCIPNASSNLVFSLLTTVIASFASLIFKAERNGVLHIVIGTATEASAHGCAKRLPRLVKVFFVFGD 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00574 341 PIRSF COBRA 119 305 IPR006918 GO:0010215|GO:0031225
Bva05g00574 341 PIRSF COBRA 1 129 IPR006918 GO:0010215|GO:0031225
Bva05g00574 341 PANTHER COBRA-LIKE PROTEIN 120 303 - -
Bva05g00574 341 PANTHER COBRA-LIKE PROTEIN 1 119 - -
Bva05g00574 341 PANTHER PROTEIN COBRA 120 303 IPR006918 GO:0010215|GO:0031225
Bva05g00574 341 Pfam COBRA-like protein 1 121 IPR006918 GO:0010215|GO:0031225
Bva05g00574 341 PANTHER PROTEIN COBRA 1 119 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00574 Bva-Chr5 2849936 2854072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00574 1 295 COBRA Gene Family AT3G02210 58.286 7.73e-142 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00574 - - oeu:111374567 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00574 05 2849936 2854072 Bva05g00574 05 2849936 2854072 ECH