Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00573 ATGAAGTATCCATGGTCCTCCATAACTGGATCTGTTGCCCATAGCAGAGGCTTCACCgttttacttgttttatttctctcttgctGCACATTCACTTCTACAGAAGCATATGATGCACTTGATCCATCTGGGAATATAACTATCAAATGGGATGTCATCAGCTGGACTCCTGATGGATATGTTGCTGTTGTCACAATGTACAACTTTCAACAGTATCGCCATATTCAGGCACCGGGGTGGACATTGGGGAACGTCCCACATTGTTGTAAGAAGGATCCAACATTAGTTGATTTACTGCCTGGAACTCCTTACAACCAGCAGATTGCAAATTGCTGCAAAGGGGGAGTCTTAAATTCATGGGGTCAGGACCCAGCTACTGCAGTAAGTTCATTTCAGGTTAGTGTGGGTGCCGCAGGAAACACGAACAAAACTGTCAAGTTGCCAAGAAATTTCACCCTCAAAGCGCCAGGGCCTGGATATACTTGTGGTCCTGCAAAGATTGTGAGGCCAACTAAATTTAGTACCAGTGACAAAAGGAGAACTACTCAAGCATTGATGACCTGGAACGTTACCTGCACATATTCTCAATTCCTGGCTCAAAAGACACCATCTTGTTGCGTTTCCCTGTCATCCTTTTATAATGATAGAGTAGTAAACTGCCCAACCTGCACATGTGGCTgtcaaaacaacaaaacagaCACTCGCAATTGTGTAGATCCAGACTCGCCATATTTAGCTTCAGTGGTATCATCTGCAGGCAAAGATGTAAATACACCCCTAGTCCAATGTACCAGCCATATGTGTCCGATTCGAGTGCATTGGCATGTGAAGCTCAATTACAAAGAATACTGGAGAGTGAAGGTCACGATCACAAATTTCAATTACAGAATGAATTATTCACAATGGAATCTTGTCGTTCAGCACCCCAATTTCGATAATCTAACCCAGCTTTTCAGTTTCAATTACAAGTCACTTAATCCTTACGAGGGCTTAAATGATACTGGAATGCTATGGGGACTCAAGTTCTATAACGATTTCCTTAGCCAAGCTGGACCTCTTGGAAATGTGCAATCAGAGCTCTTATTTAGAAAGGACAAGTCAACCTTCACATTTGATAAAGGGTGGGCTTTCCCACGTAGAATTTATTTCAATGGGGATAACTGTGTTATGCCACCTCCAGATTCCTACCCATGGCTACCAAATGCAAGTTCAAACCTAGTATTCTCTCTACTAACTACAGTCATAGCTAGCTTTGCATCTTTGATCTTCAATGATGAATGCAATGGCGTCCTTCAAAATGCTTA 1304 0.4133 MKYPWSSITGSVAHSRGFTVLLVLFLSCCTFTSTEAYDALDPSGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGNVPHCCKKDPTLVDLLPGTPYNQQIANCCKGGVLNSWGQDPATAVSSFQVSVGAAGNTNKTVKLPRNFTLKAPGPGYTCGPAKIVRPTKFSTSDKRRTTQALMTWNVTCTYSQFLAQKTPSCCVSLSSFYNDRVVNCPTCTCGCQNNKTDTRNCVDPDSPYLASVVSSAGKDVNTPLVQCTSHMCPIRVHWHVKLNYKEYWRVKVTITNFNYRMNYSQWNLVVQHPNFDNLTQLFSFNYKSLNPYEGLNDTGMLWGLKFYNDFLSQAGPLGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDSYPWLPNASSNLVFSLLTTVIASFASLIFNDECNGVLQNA 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00573 434 PANTHER COBRA-LIKE PROTEIN 83 423 - -
Bva05g00573 434 PIRSF COBRA 83 426 IPR006918 GO:0010215|GO:0031225
Bva05g00573 434 PIRSF COBRA 10 85 IPR006918 GO:0010215|GO:0031225
Bva05g00573 434 Pfam COBRA-like protein 84 195 IPR006918 GO:0010215|GO:0031225
Bva05g00573 434 PANTHER PROTEIN COBRA 83 423 IPR006918 GO:0010215|GO:0031225
Bva05g00573 434 PANTHER PROTEIN COBRA 11 83 IPR006918 GO:0010215|GO:0031225
Bva05g00573 434 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Bva05g00573 434 PANTHER COBRA-LIKE PROTEIN 11 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00573 Bva-Chr5 2847924 2850345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00573 48 411 COBRA Gene Family AT5G60920 75.381 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00573 - - gmx:100815779 749.199