Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00564 ATGGCAGCAAAGCTTTTGCAGTCATTAGCTGATGACAACCCAGATTTACAGAAGCAGATGAGATGCATGACTGGGATTTTTCAGCTCTTTGATCGTCACCATGTTCTCACTGCTCGCCGCATTAGCCAGCAGAAGAGGCTTCCTCCTGGTAATCCTCACTTTACTGATGGCAGCCTGGAAAGAGATTCTAGTAGTCTACATTATCAACAAACAGCAGCTGATGTGAGCTTAAACAAGGGAGTCATTGAGAAACAAAGAATTTCCACAGAATCATCAAGAGactctttctcttcttgttcGTCTTCCTTCTCCTCTATGGACTGTAAGGCTCAACGAGAGTGTTCTTTTGACAGGAGTCTTTTTCCAGAAACTCCCTCAAGGGACCCAGTTTTGAACCAGACAAGCATATCTCCACATTTAGGAAGGCAATCTCTTGACCTAAGGGATGTGGTGAAGGACGCTATGTATAGGGAGGCCAGAGGACTATCAGTAAAGACTACAGCCAAAGACGAAGCTTCCATTCATACTAAGAAGCATAGGGACTCCCCAAGACCTCTTCAGCTATCTGCTGATGGATCTTATGGAATTGGAATTGAAGGGAAGCAAAGTGTACCTATTGATTTTAAGGAGTCTCTCAGAGTCCTTGCTAAACTTGGAGAAGCGCCATGGTACTACGGTGACGTCAGAGAACTTCCAAGATCATCAAATGAAGTAAAAGATGGACATTGGCATCCAATTTCAAAGAATGCTCCTCGGTTTTCTTATGATGGAAGAGAAACAAGttctttatcttttgaatCACGAGAAACCATCAAATGCCCACCAAAGATAAAGGAGTTGCCTAGGCTTTCACTGGACAGTAGGGAAAATTCTTGGCGCAGTTACAGTTCTGATTCAAAAGCCATCCAACCTTCAAGGGCCTGCAATGGTGGTACTGGCACACCCACCTCAGGTGAGAAACACTATAGTCAACCACAGTCTTCAGCAACTCAGAGGCGGCCTCCTAATGTGGTAGCAAAATTGATGGGCCTAGAAGCAATACCAAATTCATGTTTGGCTGATGATGCGAAGTCAGGTTTCACTGAAACTGGCTCAGCTGAAAATAAAGGTCAGTTTCCAAGATCATCAACAAATGGGTTGAACAGGCCACCGCAAGTCTTGAATTCCCCAAAAAGCACAGTAAAAGATCCAACTTCCCCACGGTGGAAGAATCCTGATTTGGTTATGAAACCCATTTCAAGTTCTAGGTTTCCCATTGAACCAGCACCTTGGAAGCAGCCGGATGGAAATAGAAGCTCCCAGAAATCAAGCTTCCGGCCCATAAAAGCTCCAGCAAGAACAGCAGATTCATTTCCTTCTGTTTATAGTGAGATTGAGAAGAGATTGAAGGATCTTCAATTTAAACAATCTGGAAGGGATCTTAGAGCACTCCAACAGATACTGGAAGCAATGCAAGCAAAGGGGCTTTTAGAGACCAGACAAGAAGAACGAGCTTTGAATGTTGCAAGTCAGAGAGAGAATGAACCAAAAGCCACAAGTCTGATTCAGAATTCTGGGTCAATGAGACAACAACACACCCCACCGTACAGCAATTCTCAATCTTCCGCTGCCAGGGGATCTGAGCCAGCAAGGCTTTTTGAGTCCCCAATTGTGATAATGAAACCAGCAAAACTTGTTGAGAGAACTGCGATTTCTGCTTCTTCAATAATTCCAATGGGTGGTCTTTCTGGTTCCAATAAACTCCAGAGTGATGGAtatgaagataataaaaagagtCCAACTTCTAGTCGAATATCAAAAGATCAGGCCCGTAAAACTAGTCGCAGGGATGCTGCGGCCAGTTCCACTGATAAGAAAGCAAGTAGTAGCAAGACCACAAGATCCACACTGTCTCAACCAAAGTCTCAGCAACTTTCTAAAGAGAATAGCCCAAGTTCAGTAAAGAACCCAGGATCAGTGAGCCCCAGGCTGCAACAGAAGAAGCAAGAGTTAGAGAGGCGGTCTCGTCCACCTACCCCACCATCAGATTCAAATAAGGCCAGAAGGCAATCCGGTAAGCAGGCAATAGAATCAACTTCTCCAGGTGGAAAAATGAGATCAAAATCTCTCAATATGAAGCACAACGATGACCAAATGAATGAGATAAGCACTGAATCAAGAACTATAAGTTACCAAGGGGATGAAATATCTCTGCGATCAGACAGTATCACTCTTTCAGACTCAAAGATAGATATGGAAGTCACTAGCAGGTTACAGTCCGCTGAAATCAATGGTAGCCAGAGCCCATCCAATGACGCCAAGAAATCATCCCCAAGGTTGGGTGAGGACGAGCCTGTTGCAGAACTTGCAACAGATGCCCCAGAACATCCAAGCCCTGTCTCCGTTCTTGATGGCACAGTATATAGAGATGATGTACCATCTCCAATAAAGCAGATCTTCGATGCCCCCAAAGGTAATGATGCTCAAGAATCTAAAGGAAATGAGAATGAAGATCAGTGGTACGCTTCAGATGGTCTTATATCTAACAGCACAGTACCTGGGGAGATTAATCGCAAGAAATTGCAAAGCATAGATCACCTTGTTCAGAAGCTTAGACAGCTCAACGCTAGTCATGATGAAGCTAGAATTGATTATATTGCTTCGCTTTGTGAGAATACAAATCCAGACCACAGATACATCTCCGAGATATTATTAGCTTCAGGTCTCTTACTGCGTGACCTGAGTTCTGAGCTGCTGAGTTTTCAACTTCACTCTTCATGTCATCCCATTAACCCCGAGTTATTCTTTGTCTTGGAACAAACCAAGGCAAGTAGTTTGCTTCCAAAAGAAGAATGCATCTCCGGGAAAGTTTCTCAAGTGAAGCGAAACCCGGAAAAATTACACAGGAAACTCATATTTGACGCTGTGAATGAGATTCTTGGTGTAAAGCTAGCATTAGTCAGTACCCCTACTGAGCCATGGTTGAAGCCTGAGAGACTCACAAAGAAAGCCTTAAGCGCACAAAAGCTTCTTAAAGAATTGTGCTTTGAGATAGGAAAAATTCAAGCAAAGAAGCCAGAGTGCAGCTTAGAAGATGAGGATGATGATCTGAAAAGCATCCTATGGGAAGATGTAATGCATCGGTCAGAAAACTGGACAGATTTCAACGGTGAAATACCTGGGGCTGTGTTGGATATTGAGAGACTCATATTCAAGGACTTAGTTGATGAGGTTTTGATTGGGGAAGCAGCTAATTTGCGGAAGATGCCGGGTAGGCGCAGGAAGCTATTTCCTAAGTA 3278 0.4326 MAAKLLQSLADDNPDLQKQMRCMTGIFQLFDRHHVLTARRISQQKRLPPGNPHFTDGSLERDSSSLHYQQTAADVSLNKGVIEKQRISTESSRDSFSSCSSSFSSMDCKAQRECSFDRSLFPETPSRDPVLNQTSISPHLGRQSLDLRDVVKDAMYREARGLSVKTTAKDEASIHTKKHRDSPRPLQLSADGSYGIGIEGKQSVPIDFKESLRVLAKLGEAPWYYGDVRELPRSSNEVKDGHWHPISKNAPRFSYDGRETSSLSFESRETIKCPPKIKELPRLSLDSRENSWRSYSSDSKAIQPSRACNGGTGTPTSGEKHYSQPQSSATQRRPPNVVAKLMGLEAIPNSCLADDAKSGFTETGSAENKGQFPRSSTNGLNRPPQVLNSPKSTVKDPTSPRWKNPDLVMKPISSSRFPIEPAPWKQPDGNRSSQKSSFRPIKAPARTADSFPSVYSEIEKRLKDLQFKQSGRDLRALQQILEAMQAKGLLETRQEERALNVASQRENEPKATSLIQNSGSMRQQHTPPYSNSQSSAARGSEPARLFESPIVIMKPAKLVERTAISASSIIPMGGLSGSNKLQSDGYEDNKKSPTSSRISKDQARKTSRRDAAASSTDKKASSSKTTRSTLSQPKSQQLSKENSPSSVKNPGSVSPRLQQKKQELERRSRPPTPPSDSNKARRQSGKQAIESTSPGGKMRSKSLNMKHNDDQMNEISTESRTISYQGDEISLRSDSITLSDSKIDMEVTSRLQSAEINGSQSPSNDAKKSSPRLGEDEPVAELATDAPEHPSPVSVLDGTVYRDDVPSPIKQIFDAPKGNDAQESKGNENEDQWYASDGLISNSTVPGEINRKKLQSIDHLVQKLRQLNASHDEARIDYIASLCENTNPDHRYISEILLASGLLLRDLSSELLSFQLHSSCHPINPELFFVLEQTKASSLLPKEECISGKVSQVKRNPEKLHRKLIFDAVNEILGVKLALVSTPTEPWLKPERLTKKALSAQKLLKELCFEIGKIQAKKPECSLEDEDDDLKSILWEDVMHRSENWTDFNGEIPGAVLDIERLIFKDLVDEVLIGEAANLRKMPGRRRKLFPK 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00564 1092 MobiDBLite consensus disorder prediction 361 399 - -
Bva05g00564 1092 MobiDBLite consensus disorder prediction 769 783 - -
Bva05g00564 1092 MobiDBLite consensus disorder prediction 358 446 - -
Bva05g00564 1092 MobiDBLite consensus disorder prediction 500 542 - -
Bva05g00564 1092 MobiDBLite consensus disorder prediction 287 334 - -
Bva05g00564 1092 Pfam Domain of unknown function (DUF4378) 889 1070 IPR025486 -
Bva05g00564 1092 MobiDBLite consensus disorder prediction 753 794 - -
Bva05g00564 1092 MobiDBLite consensus disorder prediction 167 185 - -
Bva05g00564 1092 MobiDBLite consensus disorder prediction 753 768 - -
Bva05g00564 1092 PANTHER LONGIFOLIA PROTEIN 1 1090 - -
Bva05g00564 1092 MobiDBLite consensus disorder prediction 584 615 - -
Bva05g00564 1092 MobiDBLite consensus disorder prediction 235 259 - -
Bva05g00564 1092 MobiDBLite consensus disorder prediction 167 188 - -
Bva05g00564 1092 Pfam DUF761-associated sequence motif 325 350 IPR032795 -
Bva05g00564 1092 PANTHER LONGIFOLIA PROTEIN 1 1090 IPR033334 GO:0051513
Bva05g00564 1092 MobiDBLite consensus disorder prediction 570 727 - -
Bva05g00564 1092 MobiDBLite consensus disorder prediction 282 334 - -
Bva05g00564 1092 MobiDBLite consensus disorder prediction 673 699 - -
Bva05g00564 1092 MobiDBLite consensus disorder prediction 41 66 - -
Bva05g00564 1092 MobiDBLite consensus disorder prediction 505 539 - -
Bva05g00564 1092 MobiDBLite consensus disorder prediction 616 658 - -
Bva05g00564 1092 Coils Coil 857 877 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00564 Bva-Chr5 2792349 2797802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00564 139 1090 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 47.760 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00564 - - gmx:100787391 1400.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00564 05 2792349 2797802 Bva05g00564 05 2792349 2797802 ECH