Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00555 ATGGGGGAATGTAACAATGTTATCTCGACCTATGAAGCGGATCAACATGTGATTGCTGCAGCTCAGCACATTTTAAAGGCACTAGCTAAAAGTAAGATTGTTAGTGATGATTTGAGAAAAACTGTAATGGATCTTGACATCCATTTGTCTTCCATGTCCAGAATCAGTGGAGGAAATGGAGGGGGATTTAAAGAAGTAGAGAGGGGTCTTAAATTTGCTCAAGAGAAGGTGATGAGTTGGGAGGCAAATGATTCCATGATATGGGATTCTGGCTCCAGGGAATCTTCGGAATATTTGAAAGCTGTTGATGACATCCAAACACTTACTCAAAGTTTGCAGAGCTTATCTGTGAGTGACacttggaagaagaaaaaccttCTTCAACGAGCTGATGGGGTTCTGCATATTGCAATGTCGAGGCTTGAGGAAGAGCTAGTCCACATTCTTGTGAAGCATAAGCAGTACTTTGAGCCTGAATACATGCTTATTCATTCTAATAGAGTTGATATGGTGTTAGATGAGTCATTTGTTTCTGTTGAGGATGAAACAATCGAGGAAATACCGTGCAGGACTTCTGATGCTAGCCAATCTGTTTCTTGCACCGTAGATTTGGTGCATTCAGATATAGTTCCAGATCTCATGAGCATTGCAAATGTCATGTTTGCTTCAGGATACCATCAGGAATTCTGTCAGGGCTTCATCACTTCCAGGCGACATGCCTTGGATGAGTACATCGTTAtccttgaaattgaaaaattgagCATTGGTGATGTACTGAAAATGGAGTGGAGTTGCTTGAactttgagataaagaaatggATCCGGGCCATGAAGATCATCGTCCAGGTATATCTTCCCAGTGAGAAAAGATTGTGTAAGCAGATTCTGGGACCCTTTGGAACTGtttattcattttgctttGCTGAAATATCAAAGACTTCTATGTTTCACCTATTGAATTTCGGTGAGGCCATAGCAATGGGAACCTATACACCCGAAAAACTGTTTCGGTTACTTGACATGTATGAggttctttcttctcttgctGTGGAAGTAGATCTTTTGTTCTTTGAAGAAGTTAGTTCTTTTATCAAGGCTGAGTTTCACAAGCTTCTAACGAAGTTTGGTGACACTGTAAGGTCCACATTTCTGACGTTTGATAATGCCATTGCAACTAATCCATCAACAAACAAGTTCCCTGGAGGGGGTGTTCACCATCTTACCAAATATGTCATGAATTACATCATGACACTTTGTGAATACGGCGATACCCTTAATCTGCTTTTTGCTGATGAAAGTCCAGTTCATCCTGATATTGAGCCTGATATCTCAGCCCTCACATTTTCTCCAGTTGGTCGCCACTTTCAGAAAATCACAGCCACTCTAGAATCCAACTTGAGCAACAAATGCAGATTATACAAAGACATGGCTTTACAACACATCTTTATGATGAATAACATTCATTACATTGTCCAAAAGATTAAGAGCTCTGAACTCAGTCTTTACTTTGGGGATGCTTGGCTTCGCGTGCATACAGCTAACTTTCAGCAGGATGCTAGAAACTATGAGAGGGTCACTTGGAGTACAGCTCTTTCTTTGCTAAGAGAGGAAACTGGTTCAAAGGCAAGTCTGAAGACAAGGTACACGGGTTTCATTGATGCCTTTGAGGAAGTGTACAGGACCCAGACAGGGTGGTGCGTACCAGATGTTCAACTTCGGGAAGATTTGCAGATTTCAATTTCTCAGAAATTGGTTCATGCTTACCGGACTTTTACTGGGAAAAACTCAGCCAACATTGGCGACAAATGGATCAAATGTAATGTAGATGATCTGGAACATTATATTTTGGATCTTTTTGAAGGTTCGCCAAAATCTTTGAACCATCATCAGCTGAAAGCAAGGGGTTTGAGTTTTAGAATTTCACTTCCATA 1931 0.3915 MGECNNVISTYEADQHVIAAAQHILKALAKSKIVSDDLRKTVMDLDIHLSSMSRISGGNGGGFKEVERGLKFAQEKVMSWEANDSMIWDSGSRESSEYLKAVDDIQTLTQSLQSLSVSDTWKKKNLLQRADGVLHIAMSRLEEELVHILVKHKQYFEPEYMLIHSNRVDMVLDESFVSVEDETIEEIPCRTSDASQSVSCTVDLVHSDIVPDLMSIANVMFASGYHQEFCQGFITSRRHALDEYIVILEIEKLSIGDVLKMEWSCLNFEIKKWIRAMKIIVQVYLPSEKRLCKQILGPFGTVYSFCFAEISKTSMFHLLNFGEAIAMGTYTPEKLFRLLDMYEVLSSLAVEVDLLFFEEVSSFIKAEFHKLLTKFGDTVRSTFLTFDNAIATNPSTNKFPGGGVHHLTKYVMNYIMTLCEYGDTLNLLFADESPVHPDIEPDISALTFSPVGRHFQKITATLESNLSNKCRLYKDMALQHIFMMNNIHYIVQKIKSSELSLYFGDAWLRVHTANFQQDARNYERVTWSTALSLLREETGSKASLKTRYTGFIDAFEEVYRTQTGWCVPDVQLREDLQISISQKLVHAYRTFTGKNSANIGDKWIKCNVDDLEHYILDLFEGSPKSLNHHQLKARGLSFRISLP 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00555 643 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 627 IPR004140 GO:0000145|GO:0006887
Bva05g00555 643 Pfam Exo70 exocyst complex subunit 271 616 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bva05g00555 643 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 25 627 - -
Bva05g00555 643 Gene3D Exocyst complex component Exo70 79 628 - -
Bva05g00555 643 SUPERFAMILY Cullin repeat-like 86 620 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00555 Bva-Chr5 2742600 2745489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00555 1 620 EXO70 exocyst subunit family AT5G61010 43.520 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00555 K07195 - gmx:100791622 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00555 05 2742600 2745489 Bva05g00555 05 2742600 2745489 ECH