Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva05g00547 | ATGGCATCGGCAAAGCGATGCCACTACGAAGTCCTAGGTCTCCAGCTCGAATGCACAGCCGATGAAATCCGATCGGCTTACAAGCGGCTTGCTCTTCAACGCCATCCTGATAAGCTCGTCCAGTCCGGCTTGTCTCAAGCTGAAGCTACAGCTCAATTCCAGGAGCTGCAACATGCCTACGAGGTCCTTTCCGACCCAAAGGAACGAGCTTGGTACGACTCTCACCGTTCTCAGATTCTCTTTTCCGATCCTAACTCGGTCGGAAACTCAGTTCCTAACTCATTCATCCCTaatctcttctccttcttttctaatACCGTTTATTCTGGGTACTCAGACTCCGGCAAGGGCTTCTATAAGGTCTTTTCTGATGTGTTTGATAAAATCCACGCCAATGAGATCAATTTCACTAAGAAATTAGGCTTAGGTGTTGATGCTGTTCGACAAGCTCCTCTCATGGGTAACTTGGAAAGTCCTTATGCCCAGGTGACAGCATTTTACAATCATTGGTTGGGTTTTTCTACGGTGATGGACTTTTGCTGGGTAGACCAGTACGACGTTATGGCTGGTCCCAACCGAAAGTCGAGGCGAGTGATGGAAGATGAAAACAAGAAGCTTAGGAAGAAGGCAAGGAAAGAATACAATGAAACGGTGCGGGGATTGGCAGAGTTTGTCAAAAAGAGGGATAAAAGGGTAATCGATATGATGATAAAGAAGAATTTGGAGACTGAGAAGAGGAAAGAGGAGGAGagggagaggaagaagaagctggagaaggagaagatggAGAGAGCAATGGCATACGAGGAGCCTGAGTGGGCTAAAGTTGAGGAGGATCGAGAAGATGAGGCATACTGGTTTGAAGAGTTAGAGcaggagaagaagaggaaggatGCTGAGAAGGAGTTGTATTGTGTAGTCTGTGGGAAGAAGTTTAAGAGTGAGAAGCAATGGAAGAATCATGAGCAATCGAAGAAGCATAAAGAGAAAGTTGCTGAATTTAGGGACTCACTTGGCGATGATGAGCGATTTGAAGAGGATGTAGAGGTGGAGTTCGAAGGAGAAGGGAAGGAGATATTGGAAAGTGATGAGGAGAGAGTTGAGGTGAATGATAATCAGTCAGGCTGGACTAATAATGAGATTGATGACTTAGAGGGTAGAGTTAAAGAGTATCTCCGCACTGCAGAGGAAGATACTAGAAGAGATGGGGTTGATTTTAATAGTGATGAGAGTGGATACTTTGATTCCAACGATGCAAAGAAGGGGGAAGAGATTGGTGAGTTTGTTGGTTTTGATGATGCTGACGTGGATGTTCTTGAAGCAATGGTGGCTGGGCACAAGAGCAGAAAAAATGCTACTTCAAAGCATGAGCCCAAGGCTTCAGAGgcatcaattaaaattgataatgagAGTGGTGAGGATGGCTTTAAGGAACATGACAGACGAAAAAGCACAAGAAAGAACCGTGGAGCCAAGAAAGAGAAGGGTAGAAAAATTTGGGAGGACTCTCCGATTGGTGCTGTCAACGTTGATTATCAGAATATGAACAAGATTGAAAATGGTAATTCTCATACAGAGGAGAGTAATGGTAAAGAAAACGAGCAGATAGGTAGACATGAGAAGACTTCAAATCAACCTTATGATAAAAAAGGAACTGCAAAGGACACAAAATCCAAAGCAAAAAGTTCGtccaaaggaagaaaagctaAGgTGACATCGAAGACTCTCAGCAATGTTTGTGAGACGTGTGGAGAGGAGTTTGATTCAAGgaataaattacataaacatTTGGGTGATACTGGTCATGCTACAATAAAATATCGGTG | 1826 | 0.4091 | MASAKRCHYEVLGLQLECTADEIRSAYKRLALQRHPDKLVQSGLSQAEATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDPNSVGNSVPNSFIPNLFSFFSNTVYSGYSDSGKGFYKVFSDVFDKIHANEINFTKKLGLGVDAVRQAPLMGNLESPYAQVTAFYNHWLGFSTVMDFCWVDQYDVMAGPNRKSRRVMEDENKKLRKKARKEYNETVRGLAEFVKKRDKRVIDMMIKKNLETEKRKEEERERKKKLEKEKMERAMAYEEPEWAKVEEDREDEAYWFEELEQEKKRKDAEKELYCVVCGKKFKSEKQWKNHEQSKKHKEKVAEFRDSLGDDERFEEDVEVEFEGEGKEILESDEERVEVNDNQSGWTNNEIDDLEGRVKEYLRTAEEDTRRDGVDFNSDESGYFDSNDAKKGEEIGEFVGFDDADVDVLEAMVAGHKSRKNATSKHEPKASEASIKIDNESGEDGFKEHDRRKSTRKNRGAKKEKGRKIWEDSPIGAVNVDYQNMNKIENGNSHTEESNGKENEQIGRHEKTSNQPYDKKGTAKDTKSKAKSSSKGRKAKVTSKTLSNVCETCGEEFDSRNKLHKHLGDTGHATIKYR | 608 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva05g00547 | 608 | SUPERFAMILY | beta-beta-alpha zinc fingers | 298 | 338 | IPR036236 | - | |
Bva05g00547 | 608 | Coils | Coil | 233 | 265 | - | - | |
Bva05g00547 | 608 | SMART | ZnF_U1_5 | 300 | 334 | IPR003604 | GO:0003676|GO:0008270 | |
Bva05g00547 | 608 | ProSitePatterns | Nt-dnaJ domain signature. | 53 | 72 | IPR018253 | - | |
Bva05g00547 | 608 | Coils | Coil | 196 | 216 | - | - | |
Bva05g00547 | 608 | MobiDBLite | consensus disorder prediction | 509 | 523 | - | - | |
Bva05g00547 | 608 | Pfam | Zinc-finger double-stranded RNA-binding | 303 | 328 | IPR022755 | - | |
Bva05g00547 | 608 | CDD | DnaJ | 7 | 65 | IPR001623 | - | |
Bva05g00547 | 608 | MobiDBLite | consensus disorder prediction | 345 | 381 | - | - | |
Bva05g00547 | 608 | SMART | c2h2final6 | 578 | 602 | IPR013087 | - | |
Bva05g00547 | 608 | SMART | c2h2final6 | 303 | 327 | IPR013087 | - | |
Bva05g00547 | 608 | PANTHER | DNAJ PROTEIN JJJ1 HOMOLOG | 1 | 608 | IPR044648 | - | |
Bva05g00547 | 608 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 578 | 607 | IPR013087 | - | |
Bva05g00547 | 608 | MobiDBLite | consensus disorder prediction | 395 | 419 | - | - | |
Bva05g00547 | 608 | ProSiteProfiles | dnaJ domain profile. | 7 | 76 | IPR001623 | - | |
Bva05g00547 | 608 | Gene3D | Classic Zinc Finger | 291 | 351 | - | - | |
Bva05g00547 | 608 | PRINTS | DnaJ domain signature | 48 | 68 | IPR001623 | - | |
Bva05g00547 | 608 | PRINTS | DnaJ domain signature | 27 | 42 | IPR001623 | - | |
Bva05g00547 | 608 | PRINTS | DnaJ domain signature | 9 | 27 | IPR001623 | - | |
Bva05g00547 | 608 | SUPERFAMILY | Chaperone J-domain | 4 | 95 | IPR036869 | - | |
Bva05g00547 | 608 | Pfam | DnaJ domain | 8 | 73 | IPR001623 | - | |
Bva05g00547 | 608 | SMART | dnaj_3 | 6 | 68 | IPR001623 | - | |
Bva05g00547 | 608 | Coils | Coil | 381 | 401 | - | - | |
Bva05g00547 | 608 | MobiDBLite | consensus disorder prediction | 445 | 575 | - | - | |
Bva05g00547 | 608 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 305 | 327 | IPR013087 | - | |
Bva05g00547 | 608 | MobiDBLite | consensus disorder prediction | 524 | 562 | - | - | |
Bva05g00547 | 608 | MobiDBLite | consensus disorder prediction | 445 | 481 | - | - | |
Bva05g00547 | 608 | Gene3D | DnaJ domain | 1 | 87 | IPR036869 | - | |
Bva05g00547 | 608 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 580 | 602 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva05g00547 | Bva-Chr5 | 2702940 | 2705561 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva05g00547 | 3 | 608 | C2H2 Transcription Factor Family | AT1G74250 | 52.301 | 0.0 | 538 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Bva05g00547 | DnaJ | 2.6e-20 | CL0392 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva05g00547 | K09506 | - | gmx:100788305 | 754.977 |