Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00540 ATGTCTCCTCTACTTCTCATCTTTGCTACAATAGTAGTAGCTTTCCTTCTCTACCGCATTCTCAGCCTATTAACTCGCCCTTCTCTACCTCTGCCTCCGGGTCCTAGACCATGGCCTATCATCGGAAACTTGCCCCACATGGGTCCTGTGCCACACCACGCCCTTGCAGCCCTGGCTCGTACCTATGGGCCTCTCATGCACCTCCGGCTGGGCTGCGTCCACGTCGTGGTGGCCTCTTCGGCCTCCGTTGCCGAGCAGTTCTTGAAGGTTCATGATGCTAACTTCTCCAGCCGGCCCCCCAACGCCGGAGCTAAATACGGCGCTTACAACTATCAAGACCTTGTATTTACTCCTTACGGTCCACGGTGGCGTATGCTAAGGAAAATCAGCAACCTTCATCTATTTTCCACCAAGGCCTTAGATGATTTTAGACATCTGCGACAgGAAGAGGTATCCAGATTGATGCGCAATTTAGCGAGCGTAGGATCAAAGGCAAACTTGGGACAGTTACTTAATGTATGCACCACAAATGCATTAGGGAGGGCGATGATAGGGCGGCGCGTGTTCAACGACGGCAGCGTGGGCTGTGATCCTAGAGCTGACGAGTTCAAGTCCATGGTGGTGGAGTTGATGGAGTTGGCTGGAGTTTTCAATATTGGTGACTTTATCCCCGCTTTAGAGTGGCTGGACTTGCAGGGAGTGCAGGCTAAGTTAAAGAAACTACACAAGAGGTTTGATGCATTTTTAACCAACATTATTGAGGAACACGAGGGTTCTAAGACAGAGAAGCACAAGGACATGTTGAGTGCCTTGTTGTCATCAAAGGATGTGGCAGACGATGAGGGAAATAAACTCACAAATACAGTGATCAAAGCCCTGCTTCTGAACATGTTTACGGCTGGGACTGACACATCATCAAGTACAACGGAGTGGGGCATAGCAGAATTGCTCCGACACCCGAAAATGCTGGCCAGGGTCCGAGAAGAATTGGACTCAGTTGTGGGTCGGGACCGGGTTGTGACTGAACTGGACTTGCCCCACCTCCCCTACTTCCAGGCCGTGATAAAGGAAACCTTCCGTCTCCACCCATCAACTCCACTTTCCCTTCCAAGAATTGCAGCTGAGAGCTGTGAGATCTTCGGCTACCATATTCCTAAGGGTGCTACTCTATTGGTGAATGTTTGGGCCATTGCCCGTGATCCAAAAGAATGGCCCGACCCGTTGGAGTTCAAGCCCGAAAGGTTCCTACCGGGTGGTGAGAAGGCTCATGTTGATATTAAGGGCAATGACTTTGAAGTGATACCATTTGGTGCAGGACGTAGAATATGTGCTGGCGTGAACCTCGGGCTCCGAATGGTTCAGCTACTAACTGCAACTATGGTCCACGCGTTTGATTTCGAGCTGGAAAATGGTCTGAACCCAGGAGAGCTTAACATGGATGAAGCGTATGGGCTCACCCTGCAACGGGCAGTCCCACTATCCGCGCATGCCCGGCCGAGGCTTTCACCGCACGTGTACTCATCAATCTCATCTTCCTA 1538 0.5104 MSPLLLIFATIVVAFLLYRILSLLTRPSLPLPPGPRPWPIIGNLPHMGPVPHHALAALARTYGPLMHLRLGCVHVVVASSASVAEQFLKVHDANFSSRPPNAGAKYGAYNYQDLVFTPYGPRWRMLRKISNLHLFSTKALDDFRHLRQEEVSRLMRNLASVGSKANLGQLLNVCTTNALGRAMIGRRVFNDGSVGCDPRADEFKSMVVELMELAGVFNIGDFIPALEWLDLQGVQAKLKKLHKRFDAFLTNIIEEHEGSKTEKHKDMLSALLSSKDVADDEGNKLTNTVIKALLLNMFTAGTDTSSSTTEWGIAELLRHPKMLARVREELDSVVGRDRVVTELDLPHLPYFQAVIKETFRLHPSTPLSLPRIAAESCEIFGYHIPKGATLLVNVWAIARDPKEWPDPLEFKPERFLPGGEKAHVDIKGNDFEVIPFGAGRRICAGVNLGLRMVQLLTATMVHAFDFELENGLNPGELNMDEAYGLTLQRAVPLSAHARPRLSPHVYSSISSS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00540 512 PANTHER FLAVONOID 3'-MONOOXYGENASE CYP75B4 10 499 - -
Bva05g00540 512 SUPERFAMILY Cytochrome P450 32 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva05g00540 512 Pfam Cytochrome P450 32 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva05g00540 512 Gene3D Cytochrome P450 22 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva05g00540 512 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva05g00540 512 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva05g00540 512 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva05g00540 512 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva05g00540 512 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva05g00540 512 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva05g00540 512 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva05g00540 512 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva05g00540 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Bva05g00540 512 PANTHER CYTOCHROME P450 71B11-RELATED 10 499 - -
Bva05g00540 512 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva05g00540 512 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva05g00540 512 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00540 Bva-Chr5 2660339 2663851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00540 1 506 Cytochrome P450 AT5G07990 66.732 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00540 K05280 - gmx:547475 801.586