Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00512 ATGGGCTGTGTCAGTTCGAAGCAAGCCGTGTCGGTTACCCCTGCTGTCGACCACTCGGGTGTGTTTCGGGGCAATGTGGGTACGGGTAATTCAGGGAGGCACTTGGGTGAGTCAGATAAGAAGAAGAGTGAGTCGCTGAGCAGAAGCGAGGTAGGTGAGTCAGGGAGAGCGAGTTCAATTGGGGGCTGTGAGTCTATGAGCTTCAGATTGGGGAATCTGCAGAAGTATGTGGAGGGAGAGCAGGTAGCGGCTGGCTGGCCGGCTTGGCTTACCGCCGTCGCCGGTGAAGCCATTCAAGGTTGGGTGCCTCTTCGAGCTGATGCCTTTGAGAAACTGGAAAAGATTGGACAGGGCACCTACAGCAGCGTCTTCCGAGCAAGAGACCTTGAGACTGGGAAGATAGTGGCACTGAAGAAGGTGCGGTTTGACAATTTTGAGCCAGAGAGTGTTAGATTTATGGCACGAGAAATAATGATTCTCAGAAGGCTTGATCATCCAAACATTATCAAATTGGAGGGCTTGATTACTTCAAAATTGTCTTGTAGCATATATCTTGTGTTCGAGTACATGGAACATGACATTACAGGGCTCTTGTCTTGCCCTGATATCAAATTTAGTGAAGCGCAGATGAAATGCTACATGAAACAGTTGCTGTCTGGGATTGAGCATTGTCACTCACGAGGTGTAATGCATCGTGACATCAAAGGATCAAATCTTCTGGTGAATAATGAAGGGATATTAAAGGTGGCTGATTTTGGATTggcaaacttctctaatttgGGGCACCGGCAGCCCCTCACCAGTCGCGTTGTGACATTATGGTACCGGCCTCCTGAACTTCTGCTTGGTTCAACAGACTATGGTCCATCTGTGGATCTCTGGAGCATTGGCTGTGTATTTGCAGAACTACTTGTTGGAAAGCCTATCCTTCAGGGAAGAACAGAGGTTGAACAATTGCACAAAATCTTCAAGCTCTGTGGCTCACCGCCTGATGAGTACTGGAAGAAGACCAGACTTCCTCATGCAACTTTGTTTAAGCCACAGCAACACTATGATAGTTGTCTGCAAGGGACCTTTAAAGATTTTCCTGCAGCTAACGTGAATCTGCTACAAACTCTACTTTCCATTGAACCATACAAACGTGGGACTGCAtcatctcttctctcttccgAGTATTTCAAAACGAAGCCTTATGCATGTGATCCATCAAGCTTGCCGGTGTACCCACCAAGCAAGGAGATTGATGCTAAGCAACGAGAGGAGTCAAGGAGGAAAAAGATTAGAGGAAGAGCTCGTCGACCCGAAACAAGAAAACCATCGAGAAAGCCACTAGGATTCAGCAAATTAGCCCAAGCAGAGGATTTGGCtattcataattataattctcaTAAGGTCAATGGTAGATCTGTCTCCATCCTTAAAGAAAACACCAACGTAGGTGAGGAGGCACCAAAGACATCTACTGGTAAACCAGAAGATACTTCCCATATAAAGAATGCATCTCATGGAGATATTCCCTACTCTGGGCCACTGCAAGTTTCCACATCAAGTGGCTTTGCATGGGCGAAAAGGCGTAAAGATGATGCCCCGTTAAGATCCCATTGTCGATCTATATCAAGAGGTTCCAATACATTAGAACCTTCTGCAATAAATTCGATGAATAATCTTGACTCCAAGAACCATGAAAACAATGAATTTTGCGGGATGCGTTCCAACTCTAGGGGCCGTGACCCGCATGAATTTTCAAAGCTTGCAATGCAGAATCAATGGACCAAGCTTGATCGCCCAGATTCTTTTGATGCCTCCGATGAATACCACTCTCAAGAACTATCTATGGCACTTTATCGTAGGGAAGATTCAGCATCAAAGAGAAGCAACCTGAGTTATCAGGATCAAGGAGAGAAGGTTGAATTCTCTGGACCTTTATTATCTCAAATGCACACAGTTGACGAGCTCTTGGAACGCCATGAACGTCACATACGCCGTACAGTCCGAAGAACCTGGTTTCAGAGAGTTAAGAAGCATGGGCAGTG 2033 0.4511 MGCVSSKQAVSVTPAVDHSGVFRGNVGTGNSGRHLGESDKKKSESLSRSEVGESGRASSIGGCESMSFRLGNLQKYVEGEQVAAGWPAWLTAVAGEAIQGWVPLRADAFEKLEKIGQGTYSSVFRARDLETGKIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSKLSCSIYLVFEYMEHDITGLLSCPDIKFSEAQMKCYMKQLLSGIEHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLANFSNLGHRQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSIGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKTRLPHATLFKPQQHYDSCLQGTFKDFPAANVNLLQTLLSIEPYKRGTASSLLSSEYFKTKPYACDPSSLPVYPPSKEIDAKQREESRRKKIRGRARRPETRKPSRKPLGFSKLAQAEDLAIHNYNSHKVNGRSVSILKENTNVGEEAPKTSTGKPEDTSHIKNASHGDIPYSGPLQVSTSSGFAWAKRRKDDAPLRSHCRSISRGSNTLEPSAINSMNNLDSKNHENNEFCGMRSNSRGRDPHEFSKLAMQNQWTKLDRPDSFDASDEYHSQELSMALYRREDSASKRSNLSYQDQGEKVEFSGPLLSQMHTVDELLERHERHIRRTVRRTWFQRVKKHGQ 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00512 677 MobiDBLite consensus disorder prediction 34 49 - -
Bva05g00512 677 MobiDBLite consensus disorder prediction 423 437 - -
Bva05g00512 677 MobiDBLite consensus disorder prediction 477 496 - -
Bva05g00512 677 MobiDBLite consensus disorder prediction 21 59 - -
Bva05g00512 677 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Bva05g00512 677 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 670 - -
Bva05g00512 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Bva05g00512 677 PANTHER CELL DIVISION PROTEIN KINASE 1 670 - -
Bva05g00512 677 MobiDBLite consensus disorder prediction 404 444 - -
Bva05g00512 677 SMART serkin_6 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00512 677 Gene3D Phosphorylase Kinase; domain 1 96 191 - -
Bva05g00512 677 CDD STKc_CDK9_like 109 393 - -
Bva05g00512 677 Gene3D Transferase(Phosphotransferase) domain 1 192 432 - -
Bva05g00512 677 Pfam Protein kinase domain 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00512 677 ProSiteProfiles Protein kinase domain profile. 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00512 677 SUPERFAMILY Protein kinase-like (PK-like) 103 400 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00512 Bva-Chr5 2510563 2515183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00512 101 449 Core Cell Cycle Gene Families AT5G10270 47.671 5.35e-109 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bva05g00512 Pkinase 2.4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00512 - - gmx:100803328 1085.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01189 06 9304234 9308906 Bva05g00512 05 2510563 2515183 ECH
Bva05g00512 05 2510563 2515183 Bva05g00512 05 2510563 2515183 ECH