Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00509 ATGGGAGGAGAGAATAAAGTGGTGGCGAAGCCTCAAGCTATGTGCTCCCTATGTCTTGCTTTTTCTGTGTTCGTCTTTAGCCTCACCAACTGTGCTTCGGTCAGTGACTCTCATTTCTCACCTCCTAATAATTATCTCATTGATTGTGGGTCGACCAACAAAACCAAGCTCAAAGATGGAAGAATCTTCAAATCAGATTATGATACCACTTCTCTCCTCTCCACCAACGAAGACGTTCAAGCTTCAGTTGACTCCATCAATATAAAAGCCTCTTCCTCTGTTCCTCTTTCATCACTACCTTTATATCAAACAGCAAGAATTTTCCCAGAGGAATCCACATATACCTTTCACATCTCCAAAACAGGTCCACTGTGGGTTCGTCTCTACTTCTTCCCTCTCCCTCACTCTTCCTATAATCTAACAAGTGCTGTTTTCTCTGTTCAAACTGAACGCATTGTGCTCTTGCATGACTTCTCTATGAGAACCAATATTACACTCTTGTTCAAAGAATACCTGATCAATGTTTCAGACAGTAAATTCTCCCTAAAATTCAAGCCCAAGAAGAAGTCTTTTGCTTTCATCAATGCTATTGAGGTTGTCTCTGCACCTGATGCTCTTATCTCAAATTCAGCAGCCACAGTTCCCCCTGTCGGAGAATCGAAAGGCTTGTTTCTTTCTGCTCTCCAAATATCTTACAGAGTAAACGTTGGTGGCCCACCTATAAATCCTAACAAAGACACTTTGTCAAGAAATTGGGAACCTGATAACCCCTATAACATTTTCCCAGAGGGAACAAGAAATGCTTCTGTTCCAGCCAAAAGCATCAGATACCCAAAAGATGCCCCTTTGATTGCTCCTAGTTCTGTTTATTCAACGGGTGCACAGATGAAGGATGCTCAGGTAAATGGACCCAATTTCAACCTCAGTTGGAGAATGAATGTGGAATCAAATTATTCCTATTTGATAAGAATGCATTTCTGTGACATTGTGAGCAAAAGCCTTAATCAGTTATACTTCAATGTATATATCAACGAAATGGTGGGAATGTCAGATTTAGACCTCTCATCGCAAACTAAAGCTCTGAGAACTGCGTTCTACAAGGATTTCGTGCTTAATGAATCTGCAATCACTGATGGTTCCATCACAGTACAGGTAGGCCTTGCCAATCCGCAGCAGAGCGCAAGGAACGCAATTCTTAATGGAATCGAGGTGATGAAGATTAGCAATGCCGCCGACAGCTTGGATGGCTTATTCTCTGTGGATGGGAAATACAAGGGACCAAGTTCAACAAGAAAGACAATGAAAATTGTCGCTGGTTTTGGGTTAGCGTTTGCTGCGACGGCATTGCTGTTTATAGCGATGATTTGTATCCGGTGGCATAAGAGACCTCAAGGTTGGGAGAAGCGAAACAACTTCTCATCATGGCTTCTCCCGCTCTCCTCGAGCCAGCCGACGtcttcttgtttgttttcaaCCAAAAGCAGCAATTATGGTTCCcgcaaaagtaaaaataggATCTCTGGCTATTTCCCTTCAAACATGATTGAACGATTCTTCCCTTTCAGTGAATTACAACAGGCCACAAATAATTTCGACGAACAAGCAGTAGTTGGGGTAGGAGGTTTTGGGAAAGTGTACCTTGGTATGTTGGAAGATAGAACTAAAGTTGCTATAAAACGAGGAAATCCAACTTCGGAGCAAGGCATCAATGAGTTCAGAACAGAGTTAGACATGCTTTCCAAGCTCCGGCATCGCCACCTTGTATCACTAATAGGTTTCTGCGATGAAAATTCGGAGATGATTTTGGTATACGAATACATGGCTAATGGCCCTTTACGTTCTCACCTTTATGGCTCCAATCTTACCCATTTATCTTGGAAACAGAGGCTTGAAATATGCATTGGTGCTGCTCGTGGCCTGCACTATCTCCACACTGGTGCAGCTCAAAGCATCGTACACCGTGATGTGAAGACGACAAATATTCTCTTGGATGAGAATTTTGTTGCCAAAGTTTCAGACTTTGGCTTGTCTAAAGCTGTACCAAATAAAGCCTACGTGAGCACTGCAGTGAAAGGTAGTTTTGGGTATCTTGATCCTGAGTACTTCAGGAGTCAACAGCTAACAGAGAAATCAGATATTTACTCTTTTGGGGTTGTCCTTTTTGAGGTACTGTGTGCGAGGCCAGTTATTTGCCCTACACTGCCAACGGAGCGAGTTAACATAGCGGATTGGGCAAAGCAGCAGCATAGAAGAGGCATGCTTCATAAGATAATTGATCCACGCATTGCTGACACTATCACTTCTAATTCGCTTAAGAAGTATGTGGAAGCTGCAGAGAAATGCCTGCAAGATCAAGGTATAGATAGGCCCAATATGGGAGATGTATTACGGAATTTGGAATACGCTCTGCAGCTGCAGGAGACCGCCCCATCGATACATGCCTCAGAAGATAAAATTGcagattttattgtttttgggAGCCcagatgaaaagaaagaggatcACTCAAGGGCTAAGACTAGCGATGACCCTAATTTCACCAATTTCGCCTTGTTTTCTCAGATCACAAATTTCCAAGGCAGGTA 2585 0.4182 MGGENKVVAKPQAMCSLCLAFSVFVFSLTNCASVSDSHFSPPNNYLIDCGSTNKTKLKDGRIFKSDYDTTSLLSTNEDVQASVDSINIKASSSVPLSSLPLYQTARIFPEESTYTFHISKTGPLWVRLYFFPLPHSSYNLTSAVFSVQTERIVLLHDFSMRTNITLLFKEYLINVSDSKFSLKFKPKKKSFAFINAIEVVSAPDALISNSAATVPPVGESKGLFLSALQISYRVNVGGPPINPNKDTLSRNWEPDNPYNIFPEGTRNASVPAKSIRYPKDAPLIAPSSVYSTGAQMKDAQVNGPNFNLSWRMNVESNYSYLIRMHFCDIVSKSLNQLYFNVYINEMVGMSDLDLSSQTKALRTAFYKDFVLNESAITDGSITVQVGLANPQQSARNAILNGIEVMKISNAADSLDGLFSVDGKYKGPSSTRKTMKIVAGFGLAFAATALLFIAMICIRWHKRPQGWEKRNNFSSWLLPLSSSQPTSSCLFSTKSSNYGSRKSKNRISGYFPSNMIERFFPFSELQQATNNFDEQAVVGVGGFGKVYLGMLEDRTKVAIKRGNPTSEQGINEFRTELDMLSKLRHRHLVSLIGFCDENSEMILVYEYMANGPLRSHLYGSNLTHLSWKQRLEICIGAARGLHYLHTGAAQSIVHRDVKTTNILLDENFVAKVSDFGLSKAVPNKAYVSTAVKGSFGYLDPEYFRSQQLTEKSDIYSFGVVLFEVLCARPVICPTLPTERVNIADWAKQQHRRGMLHKIIDPRIADTITSNSLKKYVEAAEKCLQDQGIDRPNMGDVLRNLEYALQLQETAPSIHASEDKIADFIVFGSPDEKKEDHSRAKTSDDPNFTNFALFSQITNFQGR 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00509 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Bva05g00509 861 SMART serkin_6 531 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00509 861 PANTHER OS07G0166700 PROTEIN 27 828 IPR045272 GO:0004714|GO:0006468
Bva05g00509 861 Pfam Protein tyrosine and serine/threonine kinase 535 798 IPR001245 GO:0004672|GO:0006468
Bva05g00509 861 ProSitePatterns Protein kinases ATP-binding region signature. 537 559 IPR017441 GO:0005524
Bva05g00509 861 Gene3D Transferase(Phosphotransferase) domain 1 607 822 - -
Bva05g00509 861 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 27 828 - -
Bva05g00509 861 Gene3D Phosphorylase Kinase; domain 1 492 606 - -
Bva05g00509 861 SUPERFAMILY Protein kinase-like (PK-like) 516 797 IPR011009 -
Bva05g00509 861 Gene3D - 227 409 - -
Bva05g00509 861 Gene3D - 43 203 - -
Bva05g00509 861 CDD STKc_IRAK 546 800 - -
Bva05g00509 861 Pfam Malectin-like domain 47 407 IPR024788 -
Bva05g00509 861 ProSiteProfiles Protein kinase domain profile. 531 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00509 Bva-Chr5 2485444 2490158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00509 35 818 Receptor kinase-like Gene Family AT5G61350 61.875 0.0 988
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bva05g00509 Malectin_like 3.5e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00509 - - gmx:100814982 1081.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00509 05 2485444 2490158 Bva05g00509 05 2485444 2490158 ECH