Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00505 ATGGAGACTGAGGGGCTTAATTTGAACAAAGAGTCAGCTGGTGCTGGGAAAAAGAGTGGTGATGGATTCATTGATAGAAGCAAAGTAAGGATATTGTTATGCGATAACGATGCCAAGAGTTCGGAAGAGGTTTTTACGCTTCTTTCGAGATGCTCTTATCAggTTACCACAGTAAGGTCCGCAAGGCAGGTAATTGATGCACTAAACGCAGAGGGGCAAGATATAGACATCATACTAGCTGAAGTTGATCTTCCTATGAAGAAGGGCATGAAGATGTTGAAGTACATAACAAGGGACAATGAATTGCGTCGAATTCCTGTTATAATGATGTCGGCGCAAGATGAGGTATCCGTTGTTGTTAAGTGCTTGAGACTTGGAGCAGCAGACTATCTAGTAAAGCCGTTACGCACTAACGAACTATTAAACTTGTGGACGCACATGTGGAGAAGGAGGCGCATGCTTGGACTTGCAGAGAAGAACATTTTGAATTATGACCTTGATCTGGTAGCATCAGATCCTAGTGACGCTAATACAAACAGTACAACCTTATTCTCAGATGACACAGATGACAAGTCCAAGAGAAGCGCAAATCCAGATACAGTCATGTCAGTCCAACAGGAACACGAGTCTACTGTTGTTGTTGCTACTGCTACTGCTACTGTTGTTGAGGAGCCTCCAGCTACTCAAGCATCAGAATATCGGCCTGATGTGCCTGGAATTAGTGATCGCCGAACAGGACAATTTTCATCTGGTCCTAAAAAAAGTGAACTAAGGATCGGGGAGTCCTCGGCTTTCTTTACTTATGTCAAAGCAACCACGCTGAAGAGCGACTCCCAAGGGATAGCTCATGTTGACAATAACGCTGATACAGATTTGAGGGTAGAAAATATGCCTCATCCTGGTGCTCAACAGGGGGTTCATGATCTTCATATACATGAAAATAGAGAGGCATGTGAAAGCCATTCACGAGATGAGTCATTTTCCATTGAGAGGTCTTCTACTCCACCTGCATCGACTGAAGTTTCAGAGCAAAAGCACTTCATGGAAGAACATTTACCTCAGGGGGTGGTCCATCCTAGAAAAGGAACACATGGTTCTGAGCTTGAAGCTTCTGGCTTGCCTCCCCAACATGCTTATCCATATTATATTTCTGGGGTTGTTAATCACGTTATGATTCCATCATCAGCACAACTGTATCAAAAGAACCTCCAGGACCTGCAGAATCATGCCAGTACAGCTATGATAGCACAATACAATCATCTACCTCATTGTCCTTCTCATGCAAACGGAATTACATCCTTTCCGTATTATCCTATGAGTATATGCTTGCAGCCTGGTCAGATGTCTTCACCTCATTCGTGGCCATCATTTGGAAGTTCAAGTTCATCCGACGggaaattaagtaaaattgatAGGAGAGAAGCGGCATTGATTAAGTTTaggcagaaaagaaaagagcgTTGCTTTGATAAGAAAATCAGGTACGTCAATCGGAAACAACTTGCCGAAAGGCGGCCTCGTGTGAGGGGACAGTTTGTCAGAAAGTTGAATGGTGTAAATGTGGATCTCAGTGGGCAACCAGGATCCATTGACTACGATGAGGATGATgaagaggatgaagatgaCCAAGCACCAAGAGATTCTTCACCCGAGGATGCTTG 1661 0.425 METEGLNLNKESAGAGKKSGDGFIDRSKVRILLCDNDAKSSEEVFTLLSRCSYQVTTVRSARQVIDALNAEGQDIDIILAEVDLPMKKGMKMLKYITRDNELRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYDLDLVASDPSDANTNSTTLFSDDTDDKSKRSANPDTVMSVQQEHESTVVVATATATVVEEPPATQASEYRPDVPGISDRRTGQFSSGPKKSELRIGESSAFFTYVKATTLKSDSQGIAHVDNNADTDLRVENMPHPGAQQGVHDLHIHENREACESHSRDESFSIERSSTPPASTEVSEQKHFMEEHLPQGVVHPRKGTHGSELEASGLPPQHAYPYYISGVVNHVMIPSSAQLYQKNLQDLQNHASTAMIAQYNHLPHCPSHANGITSFPYYPMSICLQPGQMSSPHSWPSFGSSSSSDGKLSKIDRREAALIKFRQKRKERCFDKKIRYVNRKQLAERRPRVRGQFVRKLNGVNVDLSGQPGSIDYDEDDEEDEDDQAPRDSSPEDA 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00505 553 MobiDBLite consensus disorder prediction 179 209 - -
Bva05g00505 553 MobiDBLite consensus disorder prediction 343 365 - -
Bva05g00505 553 Gene3D - 29 234 - -
Bva05g00505 553 Pfam CCT motif 473 515 IPR010402 GO:0005515
Bva05g00505 553 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 528 IPR045279 GO:0009736
Bva05g00505 553 ProSiteProfiles Response regulatory domain profile. 30 148 IPR001789 GO:0000160
Bva05g00505 553 ProSiteProfiles CCT domain profile. 473 515 IPR010402 GO:0005515
Bva05g00505 553 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 6 528 - -
Bva05g00505 553 SUPERFAMILY CheY-like 27 154 IPR011006 -
Bva05g00505 553 MobiDBLite consensus disorder prediction 529 553 - -
Bva05g00505 553 SMART REC_2 29 144 IPR001789 GO:0000160
Bva05g00505 553 MobiDBLite consensus disorder prediction 224 255 - -
Bva05g00505 553 MobiDBLite consensus disorder prediction 518 553 - -
Bva05g00505 553 Pfam Response regulator receiver domain 31 142 IPR001789 GO:0000160
Bva05g00505 553 MobiDBLite consensus disorder prediction 316 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00505 Bva-Chr5 2462917 2469317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00505 6 552 Response Regulator Gene Family AT5G61380 50.863 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Bva05g00505 Response_reg 4.4e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00505 K12127 - gmx:100271889 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00505 05 2462917 2469317 Bva05g00505 05 2462917 2469317 ECH