Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00498 ATGAAATGCGCGGAGACAAATGCTTCGTCTCCAGGTGACCTACCTGTATTGGGTTCTTTTTTTTCGCGTGAAATACATAACAAACAAGGTGTAAGAGCCATGGGAAAGGACTCAAAGCCAAAGGAATCGGGAGGGAAGGGAAAGGGCAAACAGGCAGCAAGTGGAAGTGATGACAAGGGTAAAGGAAAAGGTGGGAAAGGCGGAGATGGCCTTGGTACCTGTACCTATGTCAAAGCAAGGCATATATTATGTGAAAAGCAAGGAAAGATCAACGAGGCTTACAAGAAGCTGCAGGACGGTTGGCTTGAGAACGGAGATAAGGTCCCGCCAGCTGAGTTTGCCAAGTTAGCCCAAGAGTATTCAGAATGCCCATCGGGAAAAAAGGGTGGGGACCTGGGATGGTTTCCACGAGGTAAGATGGCTGGGCCATTTCAAGAAGTTGCCTTCAACACACCTGTTGGAGCCACAAGTGCTCCTTTTAAGTCAACGCATGGTTACCACATTATCTTGTctgaaggaagaaagaattg 530 0.4623 MKCAETNASSPGDLPVLGSFFSREIHNKQGVRAMGKDSKPKESGGKGKGKQAASGSDDKGKGKGGKGGDGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLENGDKVPPAEFAKLAQEYSECPSGKKGGDLGWFPRGKMAGPFQEVAFNTPVGATSAPFKSTHGYHIILSEGRKN 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00498 176 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 34 176 - -
Bva05g00498 176 SUPERFAMILY FKBP-like 75 175 - -
Bva05g00498 176 MobiDBLite consensus disorder prediction 29 65 - -
Bva05g00498 176 ProSitePatterns PpiC-type peptidyl-prolyl cis-trans isomerase signature. 113 133 IPR023058 -
Bva05g00498 176 MobiDBLite consensus disorder prediction 1 70 - -
Bva05g00498 176 Gene3D - 75 174 IPR046357 GO:0003755
Bva05g00498 176 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 74 173 IPR000297 GO:0003755
Bva05g00498 176 Pfam PPIC-type PPIASE domain 77 169 - -
Bva05g00498 176 PANTHER - 34 176 IPR043323 GO:0003677|GO:0003755|GO:0006364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00498 Bva-Chr5 2438267 2441664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00498 77 172 Sulfurtransferasese or Rhodanese AT5G19370 32.653 1.10e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00498 K09579 - gmx:100801197 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00498 05 2438267 2441664 Bva05g00498 05 2438267 2441664 ECH