Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00491 ATGGCAACCGTTACGACACAAGCATCTGCTGCCGTTTTCCGGCCCTGTACCAGGCCGAGGTTCCTCACTGGGTCTTCTGGTAAATTGAACAGACAAGTGAGTTTTGGACCAATTGGgttgtcttcttcttcaaccaCTTTCAAGGTTGAAGCCAAAAGAGGCGAGTGGCTACCTGGCTTGGCATCACCAACATACCTTGATGGCAGTCTTGCCGGTGACAATGGATTTGACCCTCTGGGACTTGCTGAGGACCCTGAGAACTTGAGGTGGTTTGTGCAAGCTGAGCTTGTGAATGGACGATGGGCCATGTTGGGTGTTGCAGGAATGCTACTCCCTGAAGTTTTCACTAAGATTGGAATCATCAATGTCCCTAAATGGTACGATGCTGGCAAAGAAGAATACTTTGCATCATCATCAACCCTCTTCGTCATTGAGTTCATTTTGTTCCATTACGTCGAGATCAGACGGTGGCAGGACATCAAGAACCCCGGATGTGTTAACCAAGATCCCATCTTTAAGCAATACAGCTTACCCCCACATGAATGTGGATACCCAGGTGGCATTTTCAACCCCCTGAATTTTACCCCAACTCTTGAGGCCAAGGAGAAGGAACTTGCCAATGGGAGACTAGCAATGTTGGCATTCTTGGGATTTCTGGTTCAACACAATGTGACCGGCCTAGGACCATTTGACAACCTCTTGCAGCACCTATCAGACCCATGGCACAACACCATCATCCAGACACTGGGAGGCAAATG 758 0.4749 MATVTTQASAAVFRPCTRPRFLTGSSGKLNRQVSFGPIGLSSSSTTFKVEAKRGEWLPGLASPTYLDGSLAGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPHECGYPGGIFNPLNFTPTLEAKEKELANGRLAMLAFLGFLVQHNVTGLGPFDNLLQHLSDPWHNTIIQTLGGK 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00491 252 Gene3D Chlorophyll a/b binding protein domain 63 242 - -
Bva05g00491 252 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 251 - -
Bva05g00491 252 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 251 IPR001344 GO:0009765|GO:0016020
Bva05g00491 252 SUPERFAMILY Chlorophyll a-b binding protein 53 249 - -
Bva05g00491 252 Pfam Chlorophyll A-B binding protein 63 222 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00491 Bva-Chr5 2407645 2408840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00491 41 252 Chloroplast and Mitochondria Gene Families AT3G61470 50.917 5.99e-73 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00491 K08910 - thj:104819448 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00491 05 2407645 2408840 Bva05g00491 05 2407645 2408840 ECH