Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00482 ATGGAGAGTACTCAGCCACTCTGGGCTTGGACGTCCAATTGTGAAATAGCCAAAAATGAAGATCCTTTCCCACTTGCATgccattttccttcatatgATTTCAGTGGAGATATTGGTGATGGGTATTTTGCAGCGGATTGGACATACCAATTTTCCATGCAAGACCACCTTTATGGTACTTTCCCTATGATAGAGAGTTTACCTGAGCCTTACGAAACTCTAGCTATTGAACCTGCGACTTCGAGCTTGAAAGTTGCAGATGATGACTTCTATGCTATTAAAAATGGACTTGCTGTTTGGAATGAAAACGACGTTGTGGTTGATTCTGATAAACAGACGTTGTTGTTATGCAAAAATGGGAAGGAAATGGAGGAAGAGAGAAAGGGGAAGCGATGCagagaagagagaatgagTGGCACCAGAATGTTATCAAGGAAGACCATTTCTGAGTATTTCTACATGCCAATAACACAAGCTGCTAAAGAGCTTAACGTGGGCCTAACACTCTTGAAGAAAAGGTGCAGGGAATTGGGGATTCGAAGGTGGCCCCATAGGAAGCTAATGAGTCTTCAATCCTTGATAAAGAATCTACAGGAGCTAGGAAAAGAGGAAGGGCAggaaagtgaagaaaagatAAGGAATGCAATTGAGATattagagaaggaaaagaagctGTTGGAAGAGAAGCCAGATTTGCAGCTCGAGGACTATACCAAAAGGCTTAGGCAAGCATGTTTTAAGGCCAACtacaagaaaaggaagctCATGGGAATGGAGATGGGATCCATCGACTTCCTGCAacgttcttcttcttttctctgtgGCCATGAAAGAAGGGAAGATGATTATACTATTATTGATGAAAGAGAGGAAGACATTAATCCTCTGGTGCCTGACGCTCATTCCTCTTTCGACACAATGTTTTA 926 0.3758 MESTQPLWAWTSNCEIAKNEDPFPLACHFPSYDFSGDIGDGYFAADWTYQFSMQDHLYGTFPMIESLPEPYETLAIEPATSSLKVADDDFYAIKNGLAVWNENDVVVDSDKQTLLLCKNGKEMEEERKGKRCREERMSGTRMLSRKTISEYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQSLIKNLQELGKEEGQESEEKIRNAIEILEKEKKLLEEKPDLQLEDYTKRLRQACFKANYKKRKLMGMEMGSIDFLQRSSSFLCGHERREDDYTIIDEREEDINPLVPDAHSSFDTMF 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00482 308 PANTHER PROTEIN RKD1-RELATED 60 264 - -
Bva05g00482 308 PANTHER PROTEIN RKD4 60 264 IPR044607 GO:0003700
Bva05g00482 308 Pfam RWP-RK domain 143 190 IPR003035 -
Bva05g00482 308 ProSiteProfiles RWP-RK domain profile. 124 210 IPR003035 -
Bva05g00482 308 Coils Coil 202 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00482 Bva-Chr5 2375531 2376746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00482 36 258 AtRKD Transcription Factor Family AT1G18790 46.835 1.67e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Bva05g00482 RWP-RK 7.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00482 - - gmx:100788666 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00482 05 2375531 2376746 Bva06g01219 06 9449628 9450866 BWGD
Bva05g00482 05 2375531 2376746 Bva05g00482 05 2375531 2376746 ECH