Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00468 ATGGAGGGAGGAGATGATCTCCACCATCACCACCGCCCAAACTTCCCATTCCAACTccttgagaagaaagaagatcaagAAACTGCATCTTGTTCCACCTCATCCCCTTACCCTTCCTTAGCCATCTCCGCCGAACCCAGCACTTCCAATTCAAACCGATCCAACCAGCTCGCCCTACCAACCTCCGAAGCCTCCAATAAAAAACCGCCACCGAAAAGAACCTCCACCAAGGACCGCCACACCAAAGTGGATGGCCGCGGCCGCCGTATTCGAATGCCTGCACTCTGTGCTGCCCGTGTCTTCCAACTCACCCGCGAGCTTGGTCACAAGTCAGACGGCGAAACCATCGAGTGGCTACTCCAACAGGCTGAACCTGCCGTCATCGCCGCCACCGGCACTGGAACAATCCCAGCTAACTTCACTTCCCTTAACATATCTCTCAGAAGCTCCGGCTCCACCATGTCTGTCCCATCCCAGTTAAGATCCTCCTACTTCAATCCCAATTTCTCAGTTCAACAGCGAAGAAGCTTGTTCCCAGGAATCGGCTTGTCTTCTGACAACAGCAACAGTACTTCCACGCTTCTCAATTTCCAAACCAATAATTTAACCTCCACCATGTTGCAAGCCAAGCAGGAATTGCGTGATGGGGGTGCTCCCTCTTCTTCTACCTTGGAATTGTCCGAAACGGTGGAAGGTATGGGAAGAAAACGGAGACCTTCCTCCGACCACGACTTGTCCTCCACACAGCATCAAATGGGCAGTTATTTGTTGCAGTCTAGCGCGGGAGCCATTCCGGCGAGTCATGCTCAGATTCCGCCCAGTATTTGGATGGTCACAAATTCTAGTAATCAAGTGATGAGTGGCGATCCTTTATGGACATTCCCTCCGGTCAATAATAGTGGTTTGTACAGGGGCAACATGTCAAGCGGATTGCATTTTATGAACTTTCCTACACCTATGGCGTTGTTGCCAAGTCAACAGTTAGTGTCGTCTGGGATTGGTAGTAGCGGTAGCGGAAATGGCAGCGGCGGAAGTGggaataatataaatgaattaggGCATTTGAATATGCTAGCCGGGCTTAATCCATATCGGCCGCTGATGGGAGTTTCTGAGTCTTCTCAGGCAAGTGGGTCCCAATCACATCACGGTGGCGGCGACGATCGACATGATAGCACCAGTCACCACTCATA 1193 0.4987 MEGGDDLHHHHRPNFPFQLLEKKEDQETASCSTSSPYPSLAISAEPSTSNSNRSNQLALPTSEASNKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSVPSQLRSSYFNPNFSVQQRRSLFPGIGLSSDNSNSTSTLLNFQTNNLTSTMLQAKQELRDGGAPSSSTLELSETVEGMGRKRRPSSDHDLSSTQHQMGSYLLQSSAGAIPASHAQIPPSIWMVTNSSNQVMSGDPLWTFPPVNNSGLYRGNMSSGLHFMNFPTPMALLPSQQLVSSGIGSSGSGNGSGGSGNNINELGHLNMLAGLNPYRPLMGVSESSQASGSQSHHGGGDDRHDSTSHHS 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00468 397 MobiDBLite consensus disorder prediction 366 397 - -
Bva05g00468 397 MobiDBLite consensus disorder prediction 383 397 - -
Bva05g00468 397 MobiDBLite consensus disorder prediction 70 87 - -
Bva05g00468 397 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 8 396 - -
Bva05g00468 397 MobiDBLite consensus disorder prediction 230 244 - -
Bva05g00468 397 MobiDBLite consensus disorder prediction 212 249 - -
Bva05g00468 397 MobiDBLite consensus disorder prediction 1 28 - -
Bva05g00468 397 MobiDBLite consensus disorder prediction 1 87 - -
Bva05g00468 397 MobiDBLite consensus disorder prediction 29 69 - -
Bva05g00468 397 Pfam TCP family transcription factor 74 243 IPR017887 -
Bva05g00468 397 ProSiteProfiles TCP domain profile. 76 130 IPR017887 -
Bva05g00468 397 MobiDBLite consensus disorder prediction 329 348 - -
Bva05g00468 397 MobiDBLite consensus disorder prediction 212 228 - -
Bva05g00468 397 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 396 IPR005333 GO:0003700
Bva05g00468 397 MobiDBLite consensus disorder prediction 368 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00468 Bva-Chr5 2307389 2309131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00468 67 389 TCP Transcription Factor Family AT3G47620 45.813 2.56e-64 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva05g00468 TCP 3.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00468 - - pvu:PHAVU_003G190900g 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01232 06 9512383 9515004 Bva05g00468 05 2307389 2309131 ECH
Bva05g00468 05 2307389 2309131 Bva05g00468 05 2307389 2309131 ECH