Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00466 ATGTTAGAAGAGACATCAGAAAACAGATCTTGTCCTGGCAAAACGAACCAAGCGAAAGTCCCTAAAAGAATTCACAAGGCTGcgaaggagaaaatgaagcGTGAGCATTTGAACGAACTCTTTGTGGATCTTGCCAATGCTATTGAACTGAGTCAGCAGAACAGTGGAAAGGCATCTATATTGTGTGAAGCCACTAGGCTGCTAAAGGACTTGCTTGGTCAGATTGAGTTCCTCAAGAAGGAGAATGCATCTCTTTTATCCGAATCTCGTTATGTGACCATGGAGGAAAAAGAGCTGAAGGAGGAAAATTCTACCCTTGAAACTGAAATTGAGAAGCTTCAAGGTGAGATACAAGCAAGAATGGCTCGGTCAAAACCTGACATGAATGTACTTCCTCCTTTGGAAATTCAGGCACCAGAGCAGACTGTAGGAGACAGCCTCCAATTGCCTACCTTAGAACCTACAATGCAGCAAGGGTCTGCCGTCTTAGTTGTCCCCTTTCGTCCTCACTTTCAGTCTGCTCCTAATGCTGCTGAACTCTCGCTGAAGTCTTCCTCTAATATCAGTAAACCACACCCAAGGTATCCCACACCAGCAGATTCGTGGCCTTCACAGCTGCTTGGGGAGCTACCAACTTCGAGTTG 644 0.4441 MLEETSENRSCPGKTNQAKVPKRIHKAAKEKMKREHLNELFVDLANAIELSQQNSGKASILCEATRLLKDLLGQIEFLKKENASLLSESRYVTMEEKELKEENSTLETEIEKLQGEIQARMARSKPDMNVLPPLEIQAPEQTVGDSLQLPTLEPTMQQGSAVLVVPFRPHFQSAPNAAELSLKSSSNISKPHPRYPTPADSWPSQLLGELPTSS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00466 214 MobiDBLite consensus disorder prediction 1 24 - -
Bva05g00466 214 Coils Coil 96 123 - -
Bva05g00466 214 PANTHER TRANSCRIPTION FACTOR BHLH47 3 212 - -
Bva05g00466 214 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 21 85 IPR036638 GO:0046983
Bva05g00466 214 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 21 71 IPR011598 GO:0046983
Bva05g00466 214 PANTHER TRANSCRIPTION FACTOR BHLH47 3 212 - -
Bva05g00466 214 MobiDBLite consensus disorder prediction 181 214 - -
Bva05g00466 214 Gene3D - 18 94 IPR036638 GO:0046983
Bva05g00466 214 Coils Coil 68 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00466 Bva-Chr5 2296219 2298899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00466 8 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 52.915 5.91e-66 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00466 - - mtr:MTR_4g108360 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01234 06 9523038 9525939 Bva05g00466 05 2296219 2298899 ECH
Bva05g00466 05 2296219 2298899 Bva05g00466 05 2296219 2298899 ECH