Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00462 ATGTCTAGCCGAAGAAGATCCAGAGCTTCAAAATTCACTGATGATGAGGTTAATGATCTTGTCTCAAAGTTACAAGCATTACTGCCACAACTTAACCAAAGAAGCAACTCAAGGGCATCGGCGTCCAAGATTTTGAATGAAACATGTAGCAACATCATGAGGCTACAGAAAGAGGTGGGAGACCTTAGTGAAAGGCTGTCAGGGTTGATGGATTCTGCTGATATCAGTGATATTGACCAAGAGACTCTTAGAAGATTTTTGCAACAATG 269 0.4126 MSSRRRSRASKFTDDEVNDLVSKLQALLPQLNQRSNSRASASKILNETCSNIMRLQKEVGDLSERLSGLMDSADISDIDQETLRRFLQQ 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00462 89 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 70 IPR036638 GO:0046983
Bva05g00462 89 Gene3D - 2 86 IPR036638 GO:0046983
Bva05g00462 89 Coils Coil 45 65 - -
Bva05g00462 89 PANTHER DNA BINDING PROTEIN 1 89 IPR044172 -
Bva05g00462 89 PANTHER DNA BINDING PROTEIN 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00462 Bva-Chr5 2283564 2283918 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00462 1 74 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 56.962 1.58e-19 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00462 - - rcu:112536377 114.39