Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00458 ATGGGGAATTGCTTCGGAGCTCGTCCTCATTCTAGTTCAAAGGTTGATAACACACACCCtgtttctgcttctgcttctgaaaagcctGCTACTAAAGTTGCTGGTACAAGTGGGGGTTGCTTTGCTCAGTCGGGTGTAGCAGGACATCAAAGCAATGATAAACGTAAACGTGAGGCTCCAAGATCTGAGGGTGACATACTTTCCTTCCCGCATTTGAAAGCCTTTACATTCAATGAGCTAAAGAACGCTACTGGGAACTTTCATCTTGATAGTCTAATAGGAGAAGGAGGGTTTGGGTGTGTGTACAAGGGATGGATTGATGAACAAAGACTTGTTGCAGCAAGGCCTGGATCTGGAACACTTGTAGCTGTGAAGAAGTTAAAACTTAAAGGTTTCCAAGGGCATAAAGAGTGGCTGaGCGAAGTCAATTATCTTGGGAAACTTGATCATCCCAATCTTGTCAAACTTATTGGGTACTGCTTGGATGGGGATAACCGCCTTCTAGTATATGAGTACATGCCCAAAGGCAGTTTGGAGGACCATCTATTTCGAAGGGGTGCACTAGCACTTCCTTGGGCAACAAGGATCAAAGTTGTCACTGGCGCTGCTCGAGGTCTTGCCTTCCTACATGAGTCTGAGCAACGAGTTATCTACCGTGATTTCAAGCCTTCTAACATTTTATTGGATTCGGAATTCAATGCTAAGCTGTCCGACTTTGGTTTGGCGAAAGCAGGGCCCACCGGTGATCGTACTCATGTTTCCACTCAAGTCCTGGGCACTCAAGGTTATGCAGCCCCTGAATATCTTGGCACTGGTCACCTGACTTCAAAGTGTGATGTGTATAGCTTTGGGGTTGTATTGTTGGAAGTACTAGCAGGAAGGTATGTTattgacaaaacaaaatctgGAATGGAAGAGAATCTGGTAGATTGGGCAAGACCATATTTGGGAGATAGGAGAAAGCTATTTCGGATTATGGACACCAAGTTACAAGGGCAATACCCACAGAGGGCAGCTTATATAGTTGCAATGCTGGCATTGCAGTGTATCAGCGTGGCCAAAAACAGACCAAACATGTCTGAGGTTTTGGCTACTTTGGAACAGCTCCCACTTGTCAGACATTCAAATTCAACAACGACGACTCAGTCCATGCCAAACTCCCCTCTAATACACAATCAATATTCACCGCTCACATCCCCAACCAGACATCTTCAAGTGGAAACCTA 1226 0.438 MGNCFGARPHSSSKVDNTHPVSASASEKPATKVAGTSGGCFAQSGVAGHQSNDKRKREAPRSEGDILSFPHLKAFTFNELKNATGNFHLDSLIGEGGFGCVYKGWIDEQRLVAARPGSGTLVAVKKLKLKGFQGHKEWLSEVNYLGKLDHPNLVKLIGYCLDGDNRLLVYEYMPKGSLEDHLFRRGALALPWATRIKVVTGAARGLAFLHESEQRVIYRDFKPSNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVLGTQGYAAPEYLGTGHLTSKCDVYSFGVVLLEVLAGRYVIDKTKSGMEENLVDWARPYLGDRRKLFRIMDTKLQGQYPQRAAYIVAMLALQCISVAKNRPNMSEVLATLEQLPLVRHSNSTTTTQSMPNSPLIHNQYSPLTSPTRHLQVET 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00458 408 Gene3D Phosphorylase Kinase; domain 1 58 172 - -
Bva05g00458 408 CDD STKc_IRAK 93 369 - -
Bva05g00458 408 Gene3D Transferase(Phosphotransferase) domain 1 173 387 - -
Bva05g00458 408 Pfam Protein kinase domain 87 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00458 408 ProSitePatterns Protein kinases ATP-binding region signature. 93 126 IPR017441 GO:0005524
Bva05g00458 408 MobiDBLite consensus disorder prediction 1 63 - -
Bva05g00458 408 PANTHER OS01G0588500 PROTEIN-RELATED 42 383 - -
Bva05g00458 408 MobiDBLite consensus disorder prediction 376 408 - -
Bva05g00458 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Bva05g00458 408 ProSiteProfiles Protein kinase domain profile. 87 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00458 408 MobiDBLite consensus disorder prediction 10 31 - -
Bva05g00458 408 PANTHER BNAC02G17010D PROTEIN 42 383 - -
Bva05g00458 408 SUPERFAMILY Protein kinase-like (PK-like) 65 367 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00458 Bva-Chr5 2259026 2261625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00458 32 366 Glycoside Hydrolase AT3G07070 46.991 2.00e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva05g00458 Pkinase 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00458 - - bhj:120083681 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01243 06 9566634 9569058 Bva05g00458 05 2259026 2261625 ECH
Bva03g01291 03 12587394 12592641 Bva05g00458 05 2259026 2261625 ECH
Bva04g01205 04 8260389 8266771 Bva05g00458 05 2259026 2261625 ECH
Bva05g00458 05 2259026 2261625 Bva05g00458 05 2259026 2261625 ECH