Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00456 ATGGGGAAGTCACCAGGAAAATGGATAAAACATGTACTGTTTGGGAAAAAGTCATcgaaatcaaatttttcaaaaggaaGAGAGAAACGTGTTAATGAGAAGGAAACATTGGTGACTTCCAAAGCATTAGAAACTGGTTTGGCTTTAGATCCAACCCCTAATACTATTTCCAGAAATGAGCCGAACCAAGAGCTGGAGCATGAAGTAGCTGTAAACATTTCCCCTGAGAATCAAGAAATAGATATTGTGCAACCTGTTCATCAAGATGCACCACCTGATCCAGAGAAAATCAGGCAGGGGGAGGCTGCAACAAAGGCACAGGCCGCTTTTAGGGGTTATTTGGCTCGCAGAGCTTTTAGGGCTCTAAAAGGCATAATAAGGTTGCAAGCGCTTATTCGTGGGCACTTAGTTAGAAGACAAGCTGTTGCTACTTTCTACTGTATGTATGGAATTGTCAAGGTACAAGCACTTGTTCGTGGTGGAAGAGTTAGACAGTCTGATGTTGGATTTGAAATCCATGATAAGTGTAATCTAGTGAATCTTCAGGATGTTAAGCTCGTCAATCCAATTGGTACAACCCCAAAATTTGCAAGGCTATCAACAAATACTTTCATTCGTAAGCGTCTTGCTTCATCAACTACAGTTATGGCGCTGCGCCTCCAATATGTTCCTGGCGATCCAAATTCAGTCCTAAGTTGGCTGAAGCGGTGGTCTGTGTCTCAGTTCTGGATTCCAGTTCCCCAACCCAAGAAAATTCCAGACTCTAAATCTCACAGAAAACAGGGTGCTAATAATGCAGTTGGAGAAGCTCTTCTAAGCAAGTCAAAACGCACTAACAGAAAGCTTTCTACTGGGAATCTTGACTCAGTCTCAGCACAAGCCAATCCTGAACATGAGAAACCAAAACGAAACCTAAGAAAAGTTTCAAGCCAACAATCCACTGATCCAGTGCAGGAAAATCCACAAAGTGagcttgaaaaaattaaacgtAACTTGAGAAAGGTTCATAACCCTGTTGTTGAGAATACTGCCCAGTCAGAAGTTGAATCTGAGATTCCAAAGCAGCATTTAGAAAAAGTAACAGTTACCTCGGGTCAGGGTGTTTCAGAACCTGGAGTCACTCCTTCTAATGAGAAGACGAAGAAGGAAGCAACATTGACCAATGTGCCTGatgtggaaattactcctagacCTTCGGTTAACAAAGAGGTAACGGAGATGCCAACTGATTATCAAGCCACCATGGATACAAAGCCCTTGACTGAGAGTACAAATACAGATAAGAACATTTCTGGTGATGAAGCTTTAAATGAGCCAAAAGATCTACCAGAGAGTATTAAAGATGAGAATACCCCGTTGACAAATGGAGATTTGAGTCATAAGGAGGATCCAACTGGCAATGAAAACCAGAAACCCAGCCGAAAAGCTGCAATTCTCGCAAAGCAGGAACGTGCAGAGAACGGTTTACTGAACAGTCCAACATTACCCAGCTATATGGCAGCAACTGAATCTGCCAAGGCAAAGTTGAGAGCACAAGGGTCCCCAAGGTTTGGACAAGATGGAGTTGAGAAGAACAATGTTGCCCGGCGACATTCTCTGCCATCCTCAACTAACAGCAAAGTTAGTTCGCATTCACCGAGGACACAGAGACCTGTTCAGGCAGGTGGCAAAGGAGGGAACAGAACTGTGCCATCTTCTAGAGATGCCAACgGAAAGGTAATTCAAGCAGAGTGGAGGAGGTG 1742 0.4219 MGKSPGKWIKHVLFGKKSSKSNFSKGREKRVNEKETLVTSKALETGLALDPTPNTISRNEPNQELEHEVAVNISPENQEIDIVQPVHQDAPPDPEKIRQGEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATFYCMYGIVKVQALVRGGRVRQSDVGFEIHDKCNLVNLQDVKLVNPIGTTPKFARLSTNTFIRKRLASSTTVMALRLQYVPGDPNSVLSWLKRWSVSQFWIPVPQPKKIPDSKSHRKQGANNAVGEALLSKSKRTNRKLSTGNLDSVSAQANPEHEKPKRNLRKVSSQQSTDPVQENPQSELEKIKRNLRKVHNPVVENTAQSEVESEIPKQHLEKVTVTSGQGVSEPGVTPSNEKTKKEATLTNVPDVEITPRPSVNKEVTEMPTDYQATMDTKPLTESTNTDKNISGDEALNEPKDLPESIKDENTPLTNGDLSHKEDPTGNENQKPSRKAAILAKQERAENGLLNSPTLPSYMAATESAKAKLRAQGSPRFGQDGVEKNNVARRHSLPSSTNSKVSSHSPRTQRPVQAGGKGGNRTVPSSRDANGKVIQAEWRR 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00456 580 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 164 IPR027417 -
Bva05g00456 580 MobiDBLite consensus disorder prediction 248 332 - -
Bva05g00456 580 PANTHER PROTEIN IQ-DOMAIN 31 1 565 - -
Bva05g00456 580 Pfam Protein of unknown function (DUF4005) 483 561 IPR025064 -
Bva05g00456 580 PANTHER IQ-DOMAIN 5-RELATED 1 565 - -
Bva05g00456 580 MobiDBLite consensus disorder prediction 360 383 - -
Bva05g00456 580 MobiDBLite consensus disorder prediction 277 293 - -
Bva05g00456 580 MobiDBLite consensus disorder prediction 307 321 - -
Bva05g00456 580 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Bva05g00456 580 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Bva05g00456 580 MobiDBLite consensus disorder prediction 529 550 - -
Bva05g00456 580 Gene3D - 98 146 - -
Bva05g00456 580 MobiDBLite consensus disorder prediction 433 447 - -
Bva05g00456 580 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Bva05g00456 580 MobiDBLite consensus disorder prediction 360 580 - -
Bva05g00456 580 MobiDBLite consensus disorder prediction 405 432 - -
Bva05g00456 580 ProSiteProfiles IQ motif profile. 123 150 IPR000048 GO:0005515
Bva05g00456 580 SMART iq_5 121 142 IPR000048 GO:0005515
Bva05g00456 580 SMART iq_5 98 120 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00456 Bva-Chr5 2249559 2254823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00456 1 580 IQD Protein Family AT1G74690 44.372 3.27e-128 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00456 - - gmx:100807118 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01247 06 9590072 9595229 Bva05g00456 05 2249559 2254823 ECH
Bva08g01455 08 7616687 7622876 Bva05g00456 05 2249559 2254823 ECH
Bva11g01024 11 11882160 11885324 Bva05g00456 05 2249559 2254823 ECH
Bva05g00456 05 2249559 2254823 Bva05g00456 05 2249559 2254823 ECH