Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00452 ATGGAGGGTGGTGCTTTGGGAAGATCTGGTGACCATGGAGGTGGAGTTTACGACGAGAAGAGAAGCCAATCTAGTGTTGATGGTGATCGTGAAAGTCGTCGTGAAGAGAAGGCTGTTGATAAGGTTGCTAATCCAGTGACTACTGCCGAAATATCTATGGTAGAGACTGTAGCAACAgcattaaacaaaaatgaaaagGTTGATGAGCTTCAATCTACTATAGCAGAAATGGATGAAGtcagagaagaaaatcaaaggtTAAAGATGTCTTTGGATCGATTATTGAAGGATTATCGGTCACTGCAAATGCAATTCCAAGAGGTAGttcaacaagaaacaaaaagatcagctgataaagaaaataacaacaatGATCGAGAACTAACTGAAGAATCCGAGTTAGTTTGCCTCAGCCTTGGAAGGGTTCCATGTAAACCAAAAACCGATGATCAAACTAGCAGAGTATCAAAGCAATTGAAGGGAGAGGAATTTAATAAAGAAGAATTGTCTCTAGGACTGGACTGCAAATttgaaacaacaaaatcagGTGGATCTGCAAGAACGACTCATGAAACTTTGCCAATTCCAAGCCCCACCAATAGTTGTGAAGTACCAAAGGAAGAAGCCGGGGAGACTTGGCCAACAAGTAAAGTGCTCAAAAAGATGAGAGATAGTAATGTAGAGGATGAAGTTTCCCAACAAAATCCTGCGAAGAAAGCTAGAGTTTGCATCAGAGCACGATGTGACACCCCCACTATCAATGATGGATGCCAATGGAGGAAATATGGACAGAAGATTGCAAAGGGAAACCCTTGTCCCCGGGCTTACTATCGTTGCACAGTTGCACCATCATGCCCAGTTAGAAAACAAGTCCAAAGATGTTTTGAGGACATGTCCATTTTAATAACAACCTACGAAGGGACCCACAATCACCCTCTTCCTCTTTCAGCAACTGCTATTGCTTCCACAACTTCTGCAGCTGCTTCCATGCTTTTGTCTGGTTCATCAACCTCTCGTTCAACAGATGTCCATGGCCTCAACTTATATCTATCAGATAATGGTTCCAAACCAAAGCAATTCTACCTCTCCAATCCTGCACTATCCTCCTCACCTTCTCACCCGACTGTCACTCTTGACCTCACAAATTCAAACCCAGCCTCTTCTCATTTTGGTAGATTCCCTGCCAACTACAATCCTCCAAGATACTCTTCTTCCTCCACAAGCGTCAACTTCAGTACTTCCTCGCAATTCAATGCAGTGTCTTGGAGCAATGGATTCCTCAGCTACGGAGCTCAACCTCAACCTCAATCATATAATAACAGGAACGTGCTGAGCAACATAAACCTTGGAAGATTATA 1358 0.4043 MEGGALGRSGDHGGGVYDEKRSQSSVDGDRESRREEKAVDKVANPVTTAEISMVETVATALNKNEKVDELQSTIAEMDEVREENQRLKMSLDRLLKDYRSLQMQFQEVVQQETKRSADKENNNNDRELTEESELVCLSLGRVPCKPKTDDQTSRVSKQLKGEEFNKEELSLGLDCKFETTKSGGSARTTHETLPIPSPTNSCEVPKEEAGETWPTSKVLKKMRDSNVEDEVSQQNPAKKARVCIRARCDTPTINDGCQWRKYGQKIAKGNPCPRAYYRCTVAPSCPVRKQVQRCFEDMSILITTYEGTHNHPLPLSATAIASTTSAAASMLLSGSSTSRSTDVHGLNLYLSDNGSKPKQFYLSNPALSSSPSHPTVTLDLTNSNPASSHFGRFPANYNPPRYSSSSTSVNFSTSSQFNAVSWSNGFLSYGAQPQPQSYNNRNVLSNINLGRL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00452 452 MobiDBLite consensus disorder prediction 1 43 - -
Bva05g00452 452 MobiDBLite consensus disorder prediction 109 131 - -
Bva05g00452 452 MobiDBLite consensus disorder prediction 181 199 - -
Bva05g00452 452 MobiDBLite consensus disorder prediction 112 131 - -
Bva05g00452 452 ProSiteProfiles WRKY domain profile. 248 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva05g00452 452 MobiDBLite consensus disorder prediction 180 209 - -
Bva05g00452 452 SUPERFAMILY WRKY DNA-binding domain 247 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva05g00452 452 Pfam WRKY DNA -binding domain 254 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva05g00452 452 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 33 439 IPR044810 GO:0003700
Bva05g00452 452 SMART WRKY_cls 253 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva05g00452 452 Coils Coil 63 111 - -
Bva05g00452 452 Gene3D WRKY domain 237 315 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva05g00452 452 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 33 439 - -
Bva05g00452 452 MobiDBLite consensus disorder prediction 13 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00452 Bva-Chr5 2234077 2237079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00452 77 451 WRKY Transcription Factor Family AT5G15130 46.618 4.78e-84 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva05g00452 WRKY 8.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00452 - - pvu:PHAVU_003G192000g 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01450 08 7591589 7595149 Bva05g00452 05 2234077 2237079 BWGD
Bva06g01250 06 9605082 9608711 Bva05g00452 05 2234077 2237079 ECH
Bva03g01286 03 12537111 12540217 Bva05g00452 05 2234077 2237079 ECH
Bva08g01450 08 7591589 7595149 Bva05g00452 05 2234077 2237079 ECH
Bva05g00452 05 2234077 2237079 Bva05g00452 05 2234077 2237079 ECH