Home
Resource
Genome
JBrowse
Transcriptome
Metabolomics
Pan-genome
External database links
Search
Annotation
Pathway
Duplication type
Transposable elements
Regulatory proteins (RPs)
N6-methyladenosine (m6A)
Browse
Syn-based OGs
Gene-families
Synteny
Syn-Blocks
Syn-Dotplots
Deco-Alignments
Pvu_syntenic
Vvi_syntenic
WGDs- Genes
Anc-Genome
Anc-Reference
Tools
All tools
Genome browsing and annotation
Jbrowse
ShinyCircos
Interproscan
iTAK
Dupgen finder
Homology search and alignment
Bl-match
Seq-fatch
Blast
Diamond
Bi-visualazition
Synteny inference
MCScanX
ColinearScan
Synviso
Syn-blocks-stat
B-Dotter
BB-Dotter
BK-Dotter
Evaluation of nucleotide mutation
ParaAT
KaKs calculator
NG-KaKs-Cal
Paleogenome fractionation
Paleo-gene identifier
Syn-deco generator
Paleo-gene_RI
Paleo-gene_RII
P-index-calculator
Multi-syn-phytre
Gene structure and evolution
Codonw
Cpgfinder
MEME
GSDS
Hmmer
Pfam
FastTree
IQ-Tree2
Multigene-align
Heatmap
Lollipop
Gmapping
GF-Circos
Other auxiliary tools
GC-calculator
Seqlenth-calculator
Genstr-counter
Gam-Calculator
SAF-converter
BDI-finder
BDI-deduplicator
BDI-extractor
BDI-combiner
Seq-corrector
Subtree-splitter
Sptaxon-accessor
SS-extractor
WinO-WGDI
Block_run
KaKs calculate
Blast dotplot
Ks dotplot
Block_info
Correspondence
Statistics
Overview
Phylogenetic tree
Identification of polyploidy
Bar chart
Heatmap
Gene function annotation
Functional genes
Transcription factor
N6-methyladenosine(m6A)
Bar chart
Heatmap
Transposable elements
Documentation
Platform Manual
Pipeline flow examples
L-Wikipedia
Species introduce
Literatures
Common pests
Diseases
Economic value
Planting methods
About
Submission
Community
Contact
Gene search
Sequence information
Show
10
25
50
100
entries
Search:
Select
Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Bva05g00449
atGGGAGCAAACATGTTTAGGGTGCTATTCGTAtgtgtattatattttgttacatTTCCAACACTTAGAGGCAACATAGGGCATTTTGACGAATACTGGCAAAGCCGATCTGCAGATGCCCAACAGGCTGCTCGCGAGGCTTTCCACTCCAACCCTGAGTCTGTAACCCAGGATTTCCACGAGGCTGTGAAAGGTGCCAATAACACAAGGAGAGGTCTGAGGAGCAAGTACACCGGTCCATGCTCTGCCACAAACCCAATAGACAGTTGTTGGAGATGTGATCCCAACTGGGCAAACAACCGCAAGAAGCTAGCTGATTGTGTCCTTGGCTTTGGCAAAGGCACCACAGGAGGCAAAGATGGAAAGTTCTATGTGGTCACTGATCCATCTGACAGTGACTTGGTGAACCCCAAACCTGGAACATTGCGCCATGCTGTGATCCAACCCGTGCCATTATGGATCACCTTTGCTCATAGCATGAAGATCAGACTAAGTGAAGAGCTTTTAGTCACTTCCGATAAGACAATAGATGGTCGTGGTGCCAATGTTCATATCTCCGATGGTGCTCAAATTACGTTGCAGTTTGTGAAAAATGTAATCATTCATGGGCTGCACATCCATGATAACAAAAGGGGCAATGGTGGCATGATCAGAGACTCGGTGAATCACTATGGAATTCGCACGCATAGTGATGGAGATGGAATCTCATTGTTTGGAGCCACAAACGTGTGGATAGATCATATTTCTATGTGGAATTGCTATGATGGTTTAATTGATGCGGTCATGGCATCCACAGCCATTACCGTTTCCAACTGCCATTTTACCAAACATAATGAaGTAATGTTATTTGGTGCAGATGATGGATACTCTGGTGATAAAGTGACGCAAATAACTTTGGCTTTCAACCATTTTGGGAAAGGATTGGTGCAAAGGATGCCGAGGTGCAGATGGGGATTCTTTCATATTGTAAACAATGACTACACTCATTGGCTCATGTATGCAATTGGTGGTAGCAAAAAGCCCACCATCATCAGCCAGGGTAACCGATTTGTTGCTCCTCCCAACAAATATAGCAAAGAGGTGACAAAGAGGGCTTATGCAAGTGAAAGTGAGTGGAAGAATTGGAATTGGAGATCAGAAGGTGACGTAATGAAGAATGGAGCCTTCTTTGTTCAGTCTGGAAAACCAATTTCACTTCCCAAGACAGAAATGAAGCCAAGGCCTGGCTCAGATGTGGGCAGTCTCACGCGTTTTTCAGGTGCTTTAAACTGTATTGCCAAAAAAGCATGTTG
1292
0.4443
MGANMFRVLFVCVLYFVTFPTLRGNIGHFDEYWQSRSADAQQAAREAFHSNPESVTQDFHEAVKGANNTRRGLRSKYTGPCSATNPIDSCWRCDPNWANNRKKLADCVLGFGKGTTGGKDGKFYVVTDPSDSDLVNPKPGTLRHAVIQPVPLWITFAHSMKIRLSEELLVTSDKTIDGRGANVHISDGAQITLQFVKNVIIHGLHIHDNKRGNGGMIRDSVNHYGIRTHSDGDGISLFGATNVWIDHISMWNCYDGLIDAVMASTAITVSNCHFTKHNEVMLFGADDGYSGDKVTQITLAFNHFGKGLVQRMPRCRWGFFHIVNNDYTHWLMYAIGGSKKPTIISQGNRFVAPPNKYSKEVTKRAYASESEWKNWNWRSEGDVMKNGAFFVQSGKPISLPKTEMKPRPGSDVGSLTRFSGALNCIAKKAC
430
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Annotation information
Show
10
25
50
100
entries
Search:
Select
Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Bva05g00449
430
Pfam
Pectate lyase
168
350
IPR002022
-
Bva05g00449
430
PRINTS
Pollen allergen Amb family signature
131
156
IPR018082
-
Bva05g00449
430
PRINTS
Pollen allergen Amb family signature
333
352
IPR018082
-
Bva05g00449
430
PRINTS
Pollen allergen Amb family signature
107
124
IPR018082
-
Bva05g00449
430
PRINTS
Pollen allergen Amb family signature
311
330
IPR018082
-
Bva05g00449
430
PRINTS
Pollen allergen Amb family signature
231
252
IPR018082
-
Bva05g00449
430
PRINTS
Pollen allergen Amb family signature
167
183
IPR018082
-
Bva05g00449
430
PRINTS
Pollen allergen Amb family signature
375
399
IPR018082
-
Bva05g00449
430
Pfam
Pectate lyase, N terminus
25
73
IPR007524
GO:0030570
Bva05g00449
430
Gene3D
-
84
423
IPR012334
-
Showing 1 to 10 of 14 entries
Previous
1
2
Next
Select All
Download Selected Rows
Duplication type information
Show
10
25
50
100
entries
Search:
Select
Gene
Chromosome
Start
End
Duplicated_type
Bva05g00449
Bva-Chr5
2214896
2216747
Dispersed/Wgd
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Functional genes information
Show
10
25
50
100
entries
Search:
Select
Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Bva05g00449
3
430
Polysaccharide Lyase
AT3G01270
56.118
0.0
536
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Pathway information
Show
10
25
50
100
entries
Search:
Select
Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Bva05g00449
K01728
-
zju:107415842
630.943
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Event-related genes
Show
10
25
50
100
entries
Search:
Select
Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Bva03g01278
03
12483559
12485736
Bva05g00449
05
2214896
2216747
ECH
Bva04g01214
04
8350559
8353260
Bva05g00449
05
2214896
2216747
ECH
Bva08g01443
08
7564919
7567839
Bva05g00449
05
2214896
2216747
ECH
Bva11g01031
11
11916025
11921128
Bva05g00449
05
2214896
2216747
ECH
Bva05g00449
05
2214896
2216747
Bva05g00449
05
2214896
2216747
ECH
Showing 1 to 5 of 5 entries
Previous
1
Next
Select All
Download Selected Rows