Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00440 ATGTGCCCGCCCAGAAAACTCAAAGCAGAGGGAAGAATGGAAATGTATATTGTAGCATGGATCTTCTTAGTGATTTCTGCAACAGTTTTGTGCCCTTCGTCTCTTGCTCTCACTCAGGATGGTCTCACGTTGTTGGAAATCAAGAGCTCTTTGAATGATACAAGGAACGTTCTCAACAATTGGCAAGAGTCTGATGGGTCTCCCTGTGCATGGACTGGTATCGCTTGTCATCCAGGCGATGAACGTGTTCGGTCAATAAATTTGCCTTACATGCAACTGGCTGGGATTATATCTCCCAGCATTGGTAAACTCAGTAGGCTACAGAGGCTGGCACTTCATCAGAACAGCTTACATGGAATTATTCCCAATGAAATTACCAATTGTACTGAGCTTAGAGCATTGTACTTGAGAGGCAATTATTTCCAAGCTGGCATACCATCAGATATTGGAAATCTTTCTTACTTGACTATACTGGACTTATCGAGCAACTCATTGAAGGGTGCTATACCGTCATCTATCGGTCGTCTCTCACATTTGCGAGTTCTGAACTTGTCGACCAACTTCTTTTCTGGTGAAATCCCTGACATCGGAGCACTGAGCACGTTTGGGAAAGACTCGTTTATTGGCAATTTAGATCTTTGCGGCCGGCAAGTTCAAAAACCATGTCGGACCTCACTAGGTTTCCCTGTGGTGCTGCCGCATGATGCTGAAAGTGATGAAGCAGCAATCCCTGCCAAAAGATCATCACATTACATGAAGGGAATTCTGATTGGTGCAATATCCACAATGGGCGTTGCACTTGTCATAGTCCTTTCACTCATATGGATTTGTTTGCTAACGAAGAAGGAAAGAGCTGTCAGGAGATATACAGAAGTCAAGAAGCAAGTCGATCCACAAGCAAGCACAAAACTTATTACCTTCCATGGTGACCTGCCATACCCATCGTCTGAGATCATAGAAAAGCTAGAGGCACTTGATGAAGAGGACGTAGTAGGGTCAGGAGGATTTGGCACTGTTTATCGAATGGTCATGAATGATTGTGGAACATTCGCTGTTAAGCGGATTGATAGAAGCCGTGAAGGATCTGATCAGGTGTTTGAAAGGGAACTAGAGATTTTGGGTAGCATCAAGCACATAAATTTAGTAAATCTACGTGGTTACTGCAGATTCCCTACTTCAAAACTACTTATCTATGATTATTTGGCCACAGGCAGCTTAGATGATCTCTTGCATGAAACTAGCGAACAAGAGTCGTTAAGTTGGGATAATCGACTAAAAATAGCCCTGGGTTCTGCCGGGCCTCATGTGGCAGATTTTGGTCTTGCTAAGCTTTTGGTCGATGAGGATGCCCACGTTACAACTGTGGTGGCTGGCACATTTGGCTATCTGGCACCAGAGTACCTACAAAGTGGGAGAGCCACAGAGAAATCAGATGTATATAGCTTTGGAGTTTTATTGCTAGAAATCGTGACTGGAAAGAGACCCACAGATCCTTCCTTTGTAAAGAGAGGTTTAAATGTTGTCGGTTGGATGAACACATTGCTGAGAGAGAACAGATTGGAAGACGTGGTAGACAAGAGATGCAGTAATGCAGATTTAGCAACAGTCGAGGCTATTCTTGAATTAGCAGCAAGATGTACTGATGCAAACCCAGATGAGCGTCCATCAATGAACCAGGTGTTACAGTTGCTAGAACAAGAGGTCATGTCTCCTTGCCCAAGTGATTTTTACGAGTCCCATTCAGACCACTGCTA 1754 0.4401 MCPPRKLKAEGRMEMYIVAWIFLVISATVLCPSSLALTQDGLTLLEIKSSLNDTRNVLNNWQESDGSPCAWTGIACHPGDERVRSINLPYMQLAGIISPSIGKLSRLQRLALHQNSLHGIIPNEITNCTELRALYLRGNYFQAGIPSDIGNLSYLTILDLSSNSLKGAIPSSIGRLSHLRVLNLSTNFFSGEIPDIGALSTFGKDSFIGNLDLCGRQVQKPCRTSLGFPVVLPHDAESDEAAIPAKRSSHYMKGILIGAISTMGVALVIVLSLIWICLLTKKERAVRRYTEVKKQVDPQASTKLITFHGDLPYPSSEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRFPTSKLLIYDYLATGSLDDLLHETSEQESLSWDNRLKIALGSAGPHVADFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLEIVTGKRPTDPSFVKRGLNVVGWMNTLLRENRLEDVVDKRCSNADLATVEAILELAARCTDANPDERPSMNQVLQLLEQEVMSPCPSDFYESHSDHC 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00440 584 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Bva05g00440 584 PANTHER RECEPTOR-LIKE PROTEIN 55 14 432 - -
Bva05g00440 584 Pfam Protein kinase domain 327 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00440 584 PANTHER LRR RECEPTOR-LIKE KINASE 14 432 - -
Bva05g00440 584 Pfam Protein tyrosine and serine/threonine kinase 436 564 IPR001245 GO:0004672|GO:0006468
Bva05g00440 584 SUPERFAMILY L domain-like 38 204 - -
Bva05g00440 584 ProSiteProfiles Protein kinase domain profile. 325 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00440 584 PANTHER LRR RECEPTOR-LIKE KINASE 434 583 - -
Bva05g00440 584 PANTHER RECEPTOR-LIKE PROTEIN 55 434 583 - -
Bva05g00440 584 Pfam Leucine rich repeat N-terminal domain 39 76 IPR013210 -
Bva05g00440 584 Gene3D Transferase(Phosphotransferase) domain 1 433 572 - -
Bva05g00440 584 Pfam Leucine rich repeat 83 140 IPR001611 GO:0005515
Bva05g00440 584 Gene3D Transferase(Phosphotransferase) domain 1 314 432 - -
Bva05g00440 584 Gene3D Ribonuclease Inhibitor 38 224 IPR032675 -
Bva05g00440 584 SUPERFAMILY Protein kinase-like (PK-like) 315 566 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00440 Bva-Chr5 2181265 2184989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00440 19 573 Receptor kinase-like Gene Family AT2G35620 45.812 2.57e-177 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Bva05g00440 PK_Tyr_Ser-Thr 1.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00440 - - gmx:100803920 967.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00440 05 2181265 2184989 Bva05g00440 05 2181265 2184989 ECH