Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00438 ATGATTACAGatacattattaaattactattttacCCCGGCACATGTGGTCACCGGTTTCTCTCCTGGGCTCTGCagttttgttattgttgttgttgttgggtTGTACTCGTTTCTTTCCTTGGACCCAAGTTTGGGTGAGAGAAAGTTGGAGAAGAAGATGGGGGACAAGTCAGAAGTATTGGAGGCTGTGTTGAAGGAAACTGTCGATTTGGAGAACATCCCCATTGAGGAGGTTCTTGAGAATCTGAGATGTAGCAGGGAAGGTCTCACCACTGAGGCTGCTGAGCAGAGACTGCGTATTTTTGGGCATAACAAACTCGAAGAGAAAAAgGAGAGCAAATTTCTCAAGTTCTTGGGATTTATGTGGAATCCTCTGTCTTGGGTTATGGAGGCTGCTGCTATAATGGCAATCGCGCTTGCTAATGGAGGGGGGAAGCCCCCGGACTGGCAAGACTTTGTGGGTATCATCACCCTGCTTTTCATCAATTCAACTATTAGTTTCATTGAGGAGAACAATGCTGGTAATGCTGCAGCTGCCCTTATGGCTCGTCTCGCTCCAAAAGCAAAGGTGTTTCGAGATGGTAGGTGGAACGAGCAAGATGCTGCGGTACTGGTTCCCGGTGACATAATCAGTGTTAAACTCGGAGATATCATACCTGCTGATGCTCGTCTTCTTGAAGGGGATCCTTTGAAAATTGATCAGTCTGCACTTACTGGTGAGTCCTTGCCAGTGACGAAGGGCCCAGGTGACGGTGTGTATTCAGGTTCCACCTGCAAACAAGGAGAGATTGAAGCTGTGGTCATTGCCACTGGCGTTCATACCTTTTTTGGAAAGGCTGCTCACCTCGTAGACACCACTAATCAAGTGGGTCACTTCCAAAAGGTCTTGACTGCAATTGGGAACTTCTGCATATGTTCAATTGCTGTGGGGATGATTATTGAGATTATTGTAATGTATCCCATCCAAGACCGAAAATATCGCCCTGGAATTGATAATCTTCTTGTACTTCTTATCGGAGGAATTCCCATTGCCATGCCTACAGTCCTCTCAGTTACCATGGCCATTGGCTCTCATAGGTTATCTCAGCAGGGAGCTATCACCAAGAGAATGACGGCTATAGAAGAGATGGCAGGCATGGATGTGCTTTGCAGTGATAAGACCGGAACTCTAACATTAAACAAACTTACTGTTGACAAAAATCTTATTGAGGTTTTTACAAAAGGAGTGGATCCGGATACTGTTGTTTTGATGGCAGCTAGAGCCTCAAGAACTGAGAATCAAGATGCAATTGATTCTGCCATAGTTGGGATGTTGGCTGATCCAAAGGAGGCACGTGCTGGTATACGAGAAGTACATTTTCTGCCTTTTAATCCTACTGACAAGCGGACAGCATTGACTTATATTGACAGTGATGGTAAAATGCATAGAGTAAGCAAAGGTGCTCCAGAGCAGATTCTTAATCTTGCGCACAATAAGTCAGACATTGAGCGTAGAGTGCATGCAGTTATAGATAAGTTTGCAGAGCGAGGTTTGCGATCTCTTGCTGTAGCATACCAGGAAGTTCCAGAGGGAACAAAAGAGAGTCCTGGAGGTCCATGGCAGTTCGTTGGTCTTATGCCTCTCTTTGACCCACCTAGGCATGACAGTGCAGAAACAATCCGCAGGGCACTTAACCTTGGAGTGAATGTGAAAATGATTACAGGAGATCAACTAGCTATTGGAAAGGAAACAGGCCGTCGCTTGGGAATGGGTACTAACATGTATCCTTCGTCTGCACTACTTGGGCACGATAAGGATGAGTCCATTGCCGCCTTACCCATTGAtgaattaatagaaaaagctGACGGGTTTGCCGGTGTTTTTCCTGAGCACAAGTATGAGATTGTGAAACGCTTGCAAGCTAGGAAACATATCTGTGGAATGACTGGTGATGGAGTGAACGACGCGCCTGCTCTGAAAAAGGCAGACATTGGTATAGCTGTAGCTGATGCGACTGATGCAGCTCGTAGTGCGTCTGACATTGTTTTGACAGAACCTGGCCTCAGTGTTATCATTAGTGCTGTGTTGACTAGTCGGGCTATCTTCCAGAGAATGAAAAACTATACAATCTATGCAGTATCAATTACAATTCGTATTGTGCTTGGTTTCATGTTGCTTGCTCTCATATGGAAGTTTGACTTTCCACCTTTTATGGTCCTCATTATTGCTATCCTAAATGATGGTACTATAATGACAATTTCGAAAGATCGGGTAAAACCATCTCCCCTGCCAGATAGCTGGAAGCTTTCAGAGATATTTACCACTGGCATTATACTCGGAAGTTACTTGGCAATGATGACAGTCATATTCTTTTGGGCAGCATACAAGACAGATTTCTTCCCGCGAGTATTTGGGGTCTCAACTCTTGAAAAAACTGCTCACGATGATTTCCGAAAACTTGCCTCTGCAATCTATCTGCAAGTGAGCACTATTAGCCAGGCCCTTATATTTGTTACTCGGTCCCGAGGCTGGTCATACGTTGAGCGTCCTGGTTTATTGCTGGTGGCTGCATTTGTCGTTGCTCAGCTGATTGCCACTTTGATCGCAGTCTATGCAAACTGGAGCTTTTCAGCAATTGAAGGAATTGGTTGGGGTTGGGCTGGTGTCATATggctatataatataatattctataTCCCCCTTGATTTCATTAAGTTCTTCATTCGCTATGCTTTGAGTGGTAGGGCTTGGGATCTTGTCATTGAGCAAAGGATTGCATTTACAAGGCAAAAGGACTTTGGTAAGGAGCAACGGGAACTTCAATGGGCGCACGCACAAAGAACATTACATGGATTGCAACCACCTGACACCAAGATGTTCACCGAGCGTACCCATCACACTGAACTTAATCAAATGGCTGAGGAAGCTAAAAGAAGAGCTGAAATTGCAAGGTTACGGGAATTGCACACTCTAAAAGGTCATGTAGAATCGGTGGTGAGATTAAAGGGGCTCGACATAGACACAATTCAGCAAGCATACACAGTCTG 3029 0.4397 MITDTLLNYYFTPAHVVTGFSPGLCSFVIVVVVGLYSFLSLDPSLGERKLEKKMGDKSEVLEAVLKETVDLENIPIEEVLENLRCSREGLTTEAAEQRLRIFGHNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLFINSTISFIEENNAGNAAAALMARLAPKAKVFRDGRWNEQDAAVLVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIIEIIVMYPIQDRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDPDTVVLMAARASRTENQDAIDSAIVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESPGGPWQFVGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGHDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFTTGIILGSYLAMMTVIFFWAAYKTDFFPRVFGVSTLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRGWSYVERPGLLLVAAFVVAQLIATLIAVYANWSFSAIEGIGWGWAGVIWLYNIIFYIPLDFIKFFIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDTKMFTERTHHTELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00438 1009 Gene3D - 187 271 - -
Bva05g00438 1009 PANTHER PLASMA MEMBRANE ATPASE 1 56 989 - -
Bva05g00438 1009 SFLD C1.7: P-type atpase like 366 694 - -
Bva05g00438 1009 PANTHER CALCIUM-TRANSPORTING ATPASE 56 989 - -
Bva05g00438 1009 Pfam Cation transporter/ATPase, N-terminus 73 136 IPR004014 -
Bva05g00438 1009 Pfam E1-E2 ATPase 185 363 - -
Bva05g00438 1009 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 89 865 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bva05g00438 1009 SUPERFAMILY Calcium ATPase, transduction domain A 187 284 IPR008250 -
Bva05g00438 1009 SMART Cation_ATPase_N_a_2 70 142 IPR004014 -
Bva05g00438 1009 PRINTS H+-transporting ATPase (proton pump) signature 643 659 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva05g00438 1009 PRINTS H+-transporting ATPase (proton pump) signature 615 631 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva05g00438 1009 PRINTS H+-transporting ATPase (proton pump) signature 674 699 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva05g00438 1009 PRINTS H+-transporting ATPase (proton pump) signature 500 518 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva05g00438 1009 PRINTS H+-transporting ATPase (proton pump) signature 819 840 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva05g00438 1009 SUPERFAMILY HAD-like 380 690 IPR036412 -
Bva05g00438 1009 Gene3D - 149 874 - -
Bva05g00438 1009 Gene3D - 396 543 IPR023299 GO:0000166
Bva05g00438 1009 Gene3D - 958 1009 - -
Bva05g00438 1009 PRINTS P-type cation-transporting ATPase superfamily signature 234 248 - -
Bva05g00438 1009 PRINTS P-type cation-transporting ATPase superfamily signature 643 662 - -
Bva05g00438 1009 PRINTS P-type cation-transporting ATPase superfamily signature 560 570 - -
Bva05g00438 1009 PRINTS P-type cation-transporting ATPase superfamily signature 384 398 - -
Bva05g00438 1009 PRINTS P-type cation-transporting ATPase superfamily signature 538 549 - -
Bva05g00438 1009 PRINTS P-type cation-transporting ATPase superfamily signature 666 678 - -
Bva05g00438 1009 CDD P-type_ATPase_H 89 900 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bva05g00438 1009 ProSitePatterns E1-E2 ATPases phosphorylation site. 386 392 IPR018303 -
Bva05g00438 1009 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 618 731 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva05g00438 1009 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 156 591 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva05g00438 1009 SUPERFAMILY Calcium ATPase, transmembrane domain M 70 906 IPR023298 -
Bva05g00438 1009 SFLD p-type atpase 366 694 IPR044492 -
Bva05g00438 1009 Coils Coil 960 980 - -
Bva05g00438 1009 Gene3D - 381 680 IPR023214 -
Bva05g00438 1009 Pfam haloacid dehalogenase-like hydrolase 380 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00438 Bva-Chr5 2168183 2174225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00438 54 1009 Primary Pumps ATPases AT5G62670 93.724 0.0 1808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00438 K01535 - cpap:110819640 1771.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01269 06 9680341 9687126 Bva05g00438 05 2168183 2174225 ECH
Bva05g00438 05 2168183 2174225 Bva05g00438 05 2168183 2174225 ECH