Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00436 ATGGGAAACTGTAACGCTTGTCTGAAAGCAGAGGTCGCAGAAGACAACGCCAACCATTCTACGCAAGGAAAGAAGAGCAAGGATAGAAAATCAAACCCAAATACAGGGGAAGCTATTCGTTCGCCGGCTCCGATCCGGGTCCTGAAGGATGTGATTCCACTGAGTCATCGAACCCGAATCAGCGACAAGTATGTACTGGGTCGTGAGCTGGGTCGCGGAGAATTTGGAATCACGTACCTTTGTACGGACAGAGAGACAAAGGAAGCGCTTGCTTGTAAGTCGATTTCGAAGAGGAAGCTAAGAACGGCGGTGGATATAGAAGATGTAAGGCGCGAGGTTGCTATAATGTCTACACTACCTGAGCACCCAAACATCGTGAAGCTCAAGGCAACCTACGAGGACAACGAAAATGTGCACCTTGTGATGGAGCTCTGCGAGGGTGGTGAACTTTTTGATCGAATCGTGGCTAGAGGACATTACAGTGAGCGAGCCGCGGCAAGCGTTGCCAGAACAACAGCAGAGGTTGTCAGGATGTGCCATGCCAACGGGGTCATGCATAGGGATCTAAAGcctgaaaattttctctttgctaacaaaaaagagaattcaCCCCTTAAGGCCATTGATTTTGGGCTCTCTGTGTTTTTCAAGCCTGGAGAGAAATTTTCAGAGATTGTTGGGAGTCCTTACTATATGGCACCTGAGGTTTTGAAAAGGAACTATGGGCCGGAGGTAGACATATGGAGCGCGGGCGTGATTCTTTATATCTTGTTATGTGgggttcctccattttgggcAGAGACCGAGCAGGGTGTTGCTTTGGCGATTTTGAGGGGCGTTATTGATTTTAAGAGGGAACCTTGGCCTCAAATATCGGATAACGCAAAAAACCTAGTGCGCCAGATGTTGGAACCGGATCCTAGTAAACGCTTGACAGCTCAACAGGTGCTTGAGCATTCGTGGCTACAAAATGCGAAGAAAGCTCCAAATGTTCCACTAGGAGATATTGTGAGGTCAAGGCTTAAGCAGTTCTCTGTGATGAACAGATTCAAAAAGAAAGCCCTTCGGGTAATTGCAGAACATTTATCTGTTGAGGAGGTAGAAATAATCAAAGATATGTTTACATTGATGGATACTGACAGAGATGGCAAAATAACTTATGAGGAATTAAGGACTGGGTTGAGAAAGGTTGGTTCACAATTGGCTGAACCAGAGATAAAAATGCTGATGGAAGTGGCTGACGTTGATGGGAATGGAGTGCTTGACTATGGAGAGTTTGTAGCCGTGACAATTCACTTGCAAAAGATGGAGAATGATGAACATTTCCACAAAGCATTCAAGTTTTTTGACAAAGATGGTAGCGGGTATATTGAGTTAGATGAGCTACGAGAAGTATTAGCAGATGAGTCAGGTGAAGCTGAAGCTGATGTAGTAAATGACATCATGCGTGAGGTTGACACTGATAAGGATGGGCGCATAAGTTATGATGAGTTTGTGGCGATGATGAAAACTGGAACTGACTGGAGAAAAGCATCTAGGCAGTATTCAAGGGAGAGATTCAAGAGTTTGAGCCTAAATTTGATGAAGGACGGTTCACTTCAGCTTCAAGATGGGATTAGTGGTCAAACTGTTGTGGTTTG 1640 0.4384 MGNCNACLKAEVAEDNANHSTQGKKSKDRKSNPNTGEAIRSPAPIRVLKDVIPLSHRTRISDKYVLGRELGRGEFGITYLCTDRETKEALACKSISKRKLRTAVDIEDVRREVAIMSTLPEHPNIVKLKATYEDNENVHLVMELCEGGELFDRIVARGHYSERAAASVARTTAEVVRMCHANGVMHRDLKPENFLFANKKENSPLKAIDFGLSVFFKPGEKFSEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVALAILRGVIDFKREPWPQISDNAKNLVRQMLEPDPSKRLTAQQVLEHSWLQNAKKAPNVPLGDIVRSRLKQFSVMNRFKKKALRVIAEHLSVEEVEIIKDMFTLMDTDRDGKITYEELRTGLRKVGSQLAEPEIKMLMEVADVDGNGVLDYGEFVAVTIHLQKMENDEHFHKAFKFFDKDGSGYIELDELREVLADESGEAEADVVNDIMREVDTDKDGRISYDEFVAMMKTGTDWRKASRQYSRERFKSLSLNLMKDGSLQLQDGISGQTVVV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00436 546 CDD STKc_CAMK 63 321 - -
Bva05g00436 546 PANTHER BNAA09G44420D PROTEIN 8 522 - -
Bva05g00436 546 PANTHER SERINE/THREONINE-PROTEIN KINASE 8 522 - -
Bva05g00436 546 ProSiteProfiles Protein kinase domain profile. 64 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00436 546 ProSitePatterns EF-hand calcium-binding domain. 450 462 IPR018247 -
Bva05g00436 546 Gene3D - 331 506 - -
Bva05g00436 546 SMART serkin_6 64 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00436 546 Gene3D Phosphorylase Kinase; domain 1 65 149 - -
Bva05g00436 546 Gene3D Transferase(Phosphotransferase) domain 1 150 330 - -
Bva05g00436 546 ProSitePatterns EF-hand calcium-binding domain. 486 498 IPR018247 -
Bva05g00436 546 MobiDBLite consensus disorder prediction 18 34 - -
Bva05g00436 546 Pfam EF-hand domain pair 370 429 IPR002048 GO:0005509
Bva05g00436 546 Pfam EF-hand domain pair 440 503 IPR002048 GO:0005509
Bva05g00436 546 SMART efh_1 477 505 IPR002048 GO:0005509
Bva05g00436 546 SMART efh_1 441 469 IPR002048 GO:0005509
Bva05g00436 546 SMART efh_1 405 433 IPR002048 GO:0005509
Bva05g00436 546 SMART efh_1 369 397 IPR002048 GO:0005509
Bva05g00436 546 ProSiteProfiles EF-hand calcium-binding domain profile. 473 508 IPR002048 GO:0005509
Bva05g00436 546 ProSitePatterns EF-hand calcium-binding domain. 378 390 IPR018247 -
Bva05g00436 546 ProSiteProfiles EF-hand calcium-binding domain profile. 437 472 IPR002048 GO:0005509
Bva05g00436 546 Pfam Protein kinase domain 64 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00436 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Bva05g00436 546 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
Bva05g00436 546 ProSiteProfiles EF-hand calcium-binding domain profile. 401 436 IPR002048 GO:0005509
Bva05g00436 546 SUPERFAMILY Protein kinase-like (PK-like) 49 346 IPR011009 -
Bva05g00436 546 ProSitePatterns EF-hand calcium-binding domain. 414 426 IPR018247 -
Bva05g00436 546 SUPERFAMILY EF-hand 350 529 IPR011992 -
Bva05g00436 546 MobiDBLite consensus disorder prediction 15 42 - -
Bva05g00436 546 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00436 Bva-Chr5 2156991 2160775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00436 1 546 EF-hand Containing Proteins AT1G18890 82.967 0.0 942
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva05g00436 Pkinase 1.9e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00436 K13412 - gmx:100809838 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00436 05 2156991 2160775 Bva05g00436 05 2156991 2160775 ECH