Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00433 ATGACCCTTAAGGGTGGCACAACCCAGGCCTGTGCAGCGTGCAAATTCCAGAGAAGAAAGTGCACCCCTGAGTGCCTTCTGGCTCCATACTTTCCTGCTGACCAACCAAAGGTGTTTCAGAATGTCCACAAGTTATTTGGGGTCAGCAACATCGTAAAGATATTAAAGAATTTGGAGCCTGGCCAGAAGAAAATAGCAATGGAGTCTCTTATTTGTCAAGCAAATATCAGGGATAAATATCCTGTGCATGGTTGTTGCGAGGAAATCAGTCGGCTACGTTACCAAATATGGCAGATGGAAGAAGAGCTTTATATAGTTCAACAACAACTTGAGATGTATCGGCAACATCACCAGCATCCAGGCTCATCAATGCCTGATGATGTCACCCTCCCACTTTTCAATCATACTCCACACCCAGAGACTTACCCTACAATGGCCGCTTTTCCTGTATCACAGCAACAATCTTATTCCAATGGCAATAGTGTGGCTTACAATTCTCTTTACATGGATTCCAAGGATAATGTCCCAAACCCTTTGTGGGTTCAGCACCCATATGCAAATAACAACAGCAATTCAATGATAATGCAACCTCAATTGGTTTCCTCACAGCCACGAGCCGTGCAACAAGGAATTGTTGAGGATTATGATGAGATGCATTCATTTTTTGATACAATTGATGATAGACAATCATACACTTATTCAAAGGAGGCTTATGAGTCAAGTTCTGAAGAATCACTGAAAGATACAAGAAAGTGCATTGAGCATGTCGCTGAGAATGAATTAAAGAGTGCTGCCTCCTGCTTCAGCCTTACCAGTGTCACGTA 824 0.4284 MTLKGGTTQACAACKFQRRKCTPECLLAPYFPADQPKVFQNVHKLFGVSNIVKILKNLEPGQKKIAMESLICQANIRDKYPVHGCCEEISRLRYQIWQMEEELYIVQQQLEMYRQHHQHPGSSMPDDVTLPLFNHTPHPETYPTMAAFPVSQQQSYSNGNSVAYNSLYMDSKDNVPNPLWVQHPYANNNSNSMIMQPQLVSSQPRAVQQGIVEDYDEMHSFFDTIDDRQSYTYSKEAYESSSEESLKDTRKCIEHVAENELKSAASCFSLTSVT 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00433 274 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 7 224 - -
Bva05g00433 274 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Bva05g00433 274 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Bva05g00433 274 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00433 Bva-Chr5 2137245 2138595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00433 1 114 AS2 family AT3G47870 61.404 4.81e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva05g00433 LOB 1.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00433 - - lang:109357116 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01274 06 9717065 9718296 Bva05g00433 05 2137245 2138595 ECH
Bva05g00433 05 2137245 2138595 Bva05g00433 05 2137245 2138595 ECH