Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00432 ATGGACGGCGCCGACCCTTCCCTTTGTACGCCGGATAAGGAGGAGGATGATGAGGAAGTCGATAGTCTCTTCCGTGTTCGGCTTGCTGACGCCCCCATACTCTTATTTGTTTGCTTCCACAAGGCTATACGCGCTGAACTCGCCCAGCTCCGTCGCTTGGTCGAAACGGCGTCGTTGGAGAACAAGTCACAGAATCAAGAGCTAATTCTCAAGCTTAAAGAAAGATTTGAGTTTCTTAAACTCGTTCTCAATTATCATTGTGCTGCGGAAGATGAGGTTATTTTCCTTGCTTTGGATGTACATGTAAAAAATGTTGTATGTACGTATTACCTTGAACATAAAAGCACCGATGACctcttcaattcaatttttcgCTGTTTGGATGAGTTGATGGATCCAAAGGACAATATTTCCAAGCTTTTCCAAGAATTCGCACATTGCATTGATATCTTGCAGACCTCTATCTGTCAGCATATgctgaaagaagaaaagcagGTTTTCCCTCTCTTGATGCATAAATTGTCACCTAAAGAACAGGCCTCACTTGTGTGGCAATTCATATGTGGTGTTCCGATAATTTTGCTGGAGGAAGTTCTTCCATGGATGACCTCTTTTCTTTCGGCAAACAAACAAGCAGAGCTCAAAGAgtgtttaaaagaaatttcaccAATGGAAAAACCACTGCAAGAGgttttaatttcttgGCTTAATGGCAACAACTTGGCGTTCACTGAGCtctattttaaaagagaagGAGTTCAATGTGCTGATGAATCCGTAGATATGACAGCATCACTTGGGTTGCATTTTTATAATGGAAACTTCAAGAAACTTTCAAATTGGATGAAAGCAAATTgccaagaaagagaagatgGAGTAAACCAAGTTAATGTCCTTTCAATTTGGCATGGTGTCATCAAGAaagatatcaaagaaattCTGGAAGATCTTTATCAAATAAGAAGCTCCTCTGCGTTTCAGAATTTAGATTCAATACTTGTTCAGCTAAAATTCTTTGTTGATGTCCTCACCTTCTATAACAATGCTCAGAAGACGTTCTTTTATCCTGTATTGAGTAAACTTTGTTATAGCTGGTTGTCCAAGTCTACTGAGCAATTTCTCAGTGAAAGTCACATTGAAGATTTACAGCGATTGCTATCCTATAGCAATGAAAGTAGCATGCCTTTATGCAAATTTATAGAGAAGCTTTGCAGAGAACTTGAGTTATTTGTGATAGGAGTCAGCAAACACTTAAGTTTTCTAGAAACTGAGGTATTTCCTGTCATTAGCAAGTACTACAGCGGCGGAATGCAAGAGAGGCTTCTGGGCTTGAACCTGTATATGATGCCACTTGGGTTGCTTAAGTGTGTAATAACTTGGTTTGCGGCCCACTTGTCTGAAAACGAATCCAGGTCTACTCTCTTTCATATAGAACACGGCAATCCTCTGTTCCATAAATCTTTTGCGTCCCTACTGCATGAGTGGTTCCGTGTTGGTTATTCTGGTAAAACTTCTATTGACAAATTCCGACAGGAGTTGCAGCACACGTTCAAAATCCAACGCTTTCTTTTACCTGAGCAAATTGAAAGTGCTGCtgggttttctttcttgaattcTAACAAACAACTCCATAATGGGTCTATCATCTCTGGCAAGAAATCTCTGTCTCATTCTTCATCTTCCGGATCCGATAAGGTGGACAAATTTGTGACACCATATGCTGCAGgaattaatcttaatttatttttccctgCCACAGTAATGAAGTTACATCCCTCTCTAAAATTTCATGCCGCTAATAGTTGTTCCATGTCCTTTCTTGATAATCCACAACAAATtgacttaatatttttctttcataaggccataaagaaagatttggaTTACCTAGTTCTGGGTTCGGCTCAGTTAGATGAAAATGCTGGACTGCTTATGGATTTCCATAAACGATTCCGTCTCATATGTTTTCTTCACCAAATCCACAGTGATGCAGAAGATGAGATTGTCTTTCCGGCCTTGGAGGCAAAGGGTAAACTCAAAAACATTAGCCACTCCTACAGCATTGACCATGAACTTGAAGTTGAACATGTTAGTAAAATATCCTGCATTCTTGATAAGATGGCTGATCTACATCTTTCAGTTACTATTATTGATAACACTTGGAAGCAGAGAATGGTAAAGTATCATCAACTGTGCAGGAAGATTCAAGGAAAGTGCAAATCGATGCACAAATTGCTTTGTGACCACATACATCGCGAGGAGACTGAAATTTGGCCTGTGATCAGAGAATTCTTTTCCAATGAGGAGCAACGGAAGATCATAGGCTGCATTCTTGGAAGATTAGGAGCAGAAATATTGCAGGATATGATACCATGGCTAATGTCATCATTAACACAGAAAGAACAGCATATCCTAATGTTCTTATGGTCCATGGCTACAAAGAATACAATGTTTGATGAATGGTTAGGTGAATGGTGGGATGGGTACAGTATATCTAAGGCAACAAAGGTTTCAAAGGAACCTCCTCCACAGACTGTTGAGCCATTGGAAATTGCATCTGAATATTTATGTGAAGAAGTTCTTGATGAAATACAAGTAGAGTGCCCTCCCAACAGAGGCACTCATATTGGTGATGATGGTGACCTGTCTCAGAACTGCACTCTTGATACCAAAGACATGGTTCATGATGAAgagcaagaaaataatgaatgtTCAGAATCAATAAATCTCTTACATGATAACAGCAAACATGCATGCTATGAAACAAAAACTGAGATGGCTCCAGTAAATAAGAATCCTGGGCATTATGACCACCTTCTGAAAATGAGTCAAGACGATATGAGCCGTTGGATTGTTAGACAGCAAATATCTTTTTCTGAAGCCACTGTTGCAAGTGATGGGCCGGAATTTCCTGGGCAGCATCCATCTTACAGGGACCCTCTGAAACTGATCTATGGTTGCAAGCACTACCAGAGGAAGTGTAAGCTTTTTGCTTCCTGTTGCAACAAATTGTATACTTGCATACGTTGCCATGATGAGGTATCTGATCATTCAATTGACAGGAAATCTATTACAAAGATGATGTGCATGAGTTGTTTGGTGATTCAACCAATCACCGCGACATGCTCAACAGTTTCTTGCAACAATTTATCCATGGCGAGATACTACTGCAGAATCTGCAGATTATTTGATGATACGAGGGAAATTTACCACTGTCCCTATTGTAACCTGTGCCGAGTTGGAAAGGGGTTGGGCGTAGAATACTTTCATTGTATGAACTGCAATGCTTGTATGTCACGCGCTCTTGCAGTACACATATGCAGAGAGAAATCTTTAGAGGATAATTGTCCAATTTGTTATGAATACATTTTCACATCCTCTAATCCTGTAAAGGCCCTTCCATGTGGTCATGCGATGCATTCAACATGTTTTGAGGAATATACCTCTTTTAACTATACATGCCCAATCTGTGGCAAGTCACTTGGGGACATGCAGGTATACTTCGGGATGTTAGATGCGTTATTGGCTGAAGAGAAAGTTTCAGATGAGTTTTCGAGTCAATGTCAGGCTATACTGTGTCATGACTGTGAGAAGAAGGGAGAGGCTTCGTTTCATTGGCTTTACCACAAATGCCCTTCTTGTGGTTCCTACAATACCAGAGTCCTATG 3668 0.3822 MDGADPSLCTPDKEEDDEEVDSLFRVRLADAPILLFVCFHKAIRAELAQLRRLVETASLENKSQNQELILKLKERFEFLKLVLNYHCAAEDEVIFLALDVHVKNVVCTYYLEHKSTDDLFNSIFRCLDELMDPKDNISKLFQEFAHCIDILQTSICQHMLKEEKQVFPLLMHKLSPKEQASLVWQFICGVPIILLEEVLPWMTSFLSANKQAELKECLKEISPMEKPLQEVLISWLNGNNLAFTELYFKREGVQCADESVDMTASLGLHFYNGNFKKLSNWMKANCQEREDGVNQVNVLSIWHGVIKKDIKEILEDLYQIRSSSAFQNLDSILVQLKFFVDVLTFYNNAQKTFFYPVLSKLCYSWLSKSTEQFLSESHIEDLQRLLSYSNESSMPLCKFIEKLCRELELFVIGVSKHLSFLETEVFPVISKYYSGGMQERLLGLNLYMMPLGLLKCVITWFAAHLSENESRSTLFHIEHGNPLFHKSFASLLHEWFRVGYSGKTSIDKFRQELQHTFKIQRFLLPEQIESAAGFSFLNSNKQLHNGSIISGKKSLSHSSSSGSDKVDKFVTPYAAGINLNLFFPATVMKLHPSLKFHAANSCSMSFLDNPQQIDLIFFFHKAIKKDLDYLVLGSAQLDENAGLLMDFHKRFRLICFLHQIHSDAEDEIVFPALEAKGKLKNISHSYSIDHELEVEHVSKISCILDKMADLHLSVTIIDNTWKQRMVKYHQLCRKIQGKCKSMHKLLCDHIHREETEIWPVIREFFSNEEQRKIIGCILGRLGAEILQDMIPWLMSSLTQKEQHILMFLWSMATKNTMFDEWLGEWWDGYSISKATKVSKEPPPQTVEPLEIASEYLCEEVLDEIQVECPPNRGTHIGDDGDLSQNCTLDTKDMVHDEEQENNECSESINLLHDNSKHACYETKTEMAPVNKNPGHYDHLLKMSQDDMRQQISFSEATVASDGPEFPGQHPSYRDPLKLIYGCKHYQRKCKLFASCCNKLYTCIRCHDEVSDHSIDRKSITKMMCMSCLVIQPITATCSTVSCNNLSMARYYCRICRLFDDTREIYHCPYCNLCRVGKGLGVEYFHCMNCNACMSRALAVHICREKSLEDNCPICYEYIFTSSNPVKALPCGHAMHSTCFEEYTSFNYTCPICGKSLGDMQVYFGMLDALLAEEKVSDEFSSQCQAILCHDCEKKGEASFHWLYHKCPSCGSYNTRVL 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00432 1217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1104 1154 IPR013083 -
Bva05g00432 1217 CDD RING-H2_Pirh2 1110 1152 - -
Bva05g00432 1217 Coils Coil 40 67 - -
Bva05g00432 1217 SUPERFAMILY Zinc hairpin stack 1048 1102 IPR037275 -
Bva05g00432 1217 ProSiteProfiles Zinc finger CHY-type profile. 975 1044 IPR008913 GO:0008270
Bva05g00432 1217 CDD Hr-like 39 168 - -
Bva05g00432 1217 SUPERFAMILY CHY zinc finger-like 973 1038 IPR037274 GO:0008270
Bva05g00432 1217 Pfam Hemerythrin HHE cation binding domain 40 170 IPR012312 -
Bva05g00432 1217 Pfam Hemerythrin HHE cation binding domain 617 759 IPR012312 -
Bva05g00432 1217 Pfam Zinc-ribbon 1158 1215 IPR039512 -
Bva05g00432 1217 CDD Hr-like 614 759 - -
Bva05g00432 1217 Gene3D - 1182 1217 - -
Bva05g00432 1217 Pfam CHY zinc finger 982 1057 IPR008913 GO:0008270
Bva05g00432 1217 Gene3D nmb1532 protein domain like 607 779 - -
Bva05g00432 1217 Gene3D nmb1532 protein domain like 31 188 - -
Bva05g00432 1217 Gene3D nmb1532 protein domain like 292 442 - -
Bva05g00432 1217 SUPERFAMILY RING/U-box 1098 1157 - -
Bva05g00432 1217 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 24 1217 - -
Bva05g00432 1217 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 24 1217 - -
Bva05g00432 1217 ProSiteProfiles Zinc finger CTCHY-type profile. 1047 1110 IPR017921 -
Bva05g00432 1217 Pfam Ring finger domain 1109 1152 IPR001841 -
Bva05g00432 1217 SMART ring_2 1111 1152 IPR001841 -
Bva05g00432 1217 ProSiteProfiles Zinc finger RING-type profile. 1111 1152 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00432 Bva-Chr5 2128611 2137021 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00432 605 835 C2H2 Transcription Factor Family AT3G18290 25.210 1.58e-14 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00432 K16276 - gmx:100802706 1659.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00432 05 2128611 2137021 Bva05g00432 05 2128611 2137021 ECH