Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00427 ATGTCCGAGGGATCTTCACCTCCTCCTCCGATTTCCGGTGAACGATCCTCACCTGAACCCAATTGCCAAAACCACGTTACCGATTCCCAGAACGAAACCCCCACTGCCAAAGAGGAGACTACCAGCGCTCCGGCTCCCGCTCCCCCTACTACAAGGAGCAACCGCCCCTCTCGCGCGTGCACCATTCGCGCTGCTTCTCGTCTCTATTCAACAGCGCAGCCGGCGATCGAACGAAAGCCCAAAGCTGCAAAGAAGGAGCAGCGGCAGGACGAGTCGCCTCAGCAACAGCAATGCAGCAAGATCGTCACGCCGCTTGTGGAACCGCCCCCACCTGCGCAGTTGCCTCGGTGGAACCTGCGGTCCATGTGGGAGTTAGCTTCCGTACTCAATTTCTTGCATGTATTTATGCCTCTTTTGAATATCTCAGTAGAATTCTCGGCTGAGGAGTTTGAGACAGCTCTCCTCACGCCCAATGATACATTGAGTGATATACATATGCCCTTGCTAAAGGCAATCCCTCCCATTACACGAATGGCACTTACACGTGATACTTGGATTACCGTATTATGCAGAAAATTGAGAGATTGGTGGCATTGGGTCGCCGATGGGGATATTCCAATTGTTGCTTCCCATGGGGCGGAGATTGAAGTATATAAATCACTTGATCCAGGGGTCCGTGTGGTTATCTTGAAAGCATTATGTGACATTCGGGTTGAGCAAGAAGATATACGAAGCTATATTGACCACTCACTCAAACATGGTGTTCAATTTTCAACATTCCGTAAAGAGCGTATAGGGGGTGATTCACAAGGAATTTCTTACTGGTATGAAGATGACCCAATTATTGGTCATAGGTTGTATCGGGAAATAAGGAAAACTGAAGTGAAGGAAGTGAAGAAAGGGAAAACTAAAGGTTCCCAGGTCCTTCCTCGTACAACATATCAGTGGGAAGCAGTTGCTactaattttgatgaatttcaaGATGTTTCTGAGAAGCTTTTCTCAAGTAAGAACAGAACGGAGGCTTCTCTAGgaaagaagttgaagaatgACATGCTTCCTGAGATTGAGAAAGTTCATAAGAGGAAAGAGAGGTTGCTGAAAAAGCAACATAGACAAGCTCTTCTTCTTGATAATTTCTTGGTTGTTGATGGGCTTGCTCCTGGGCGTTCCCTTCGTGATAGGAAACCTGTGACCTACACGTTTGATGATTATGATCGTTCCATCAATGAGGCGATCAAGATAACcaaAAAGAAACAACCATCCCCAGAACCTATGCCTAGTAGGGAAGTAGTAGCTAAACCTGAAGGTTTACCTAATGGTAAATGGAATGGTTCTCCGCATGCCCCTCAACACATTAGCTTTCATATGTCATCTCCAAAATCACCCGACTACGATGATGAGGAGGAGGAAGATCACAAAGATGAAGAATTGGATCGAAGCAATCGGCGGAGACAGCGGCCTCAGCGGTATTCTGAGAAAGAGTTCGTTGAAGCATTGTCAGATAATGAGGCAGACTTTGACAGTGATGATGATATTGTTGGAGAAGCCATATATGACGAGGAATATTTAAGGAAACGGAAGCAGAGGAAGAAGCTTTCTAGTAGCTCTGAAGGAGACGAAGAGTATCAGTGGGATGAAGAAAATggcgaagaagaagaagaagaatatgatgatgaagattCCTTGAGCATTAGTGAAGATAGTGTTGAGCCCCGGAAAGTCAAGAAATTGCCAGGCCGTACAAGGAGGGAAACTAAACTCAGGTCTGTAGATGAGATTCAATCAGGTCTAAGACGGAGTAAGAGGGCCAGTAGAAATCGGATTAATTACCGACAGTACGAGATGTCAGAATCTGAAACAGAGTCTATGAAACCTGAGAAATCTAACGCAACAGATGACCACTCAGAAGCCAGTGAGAATGGGGAATATATGATGGACAGTGAAGATACAGATAATGGCAACGACGATCATGACGAAATGGAAGTAGAAAATCCCGTAGCTTATCCAGAagttaaagagaaagaaaaacagccTCCTGAAAAATCAAGTAGTCCTCCTGGTCAGGACGAAGTGGAGGGCATGGGAAAAAGACGTTTCCTTGATTTAAATGAGCTTGCTCCCAGTTCTGGTTTTGACGATGGTCCAAATACGATAATGAAAGACGAAGACAAGAATGATTACTG 2186 0.4378 MSEGSSPPPPISGERSSPEPNCQNHVTDSQNETPTAKEETTSAPAPAPPTTRSNRPSRACTIRAASRLYSTAQPAIERKPKAAKKEQRQDESPQQQQCSKIVTPLVEPPPPAQLPRWNLRSMWELASVLNFLHVFMPLLNISVEFSAEEFETALLTPNDTLSDIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWHWVADGDIPIVASHGAEIEVYKSLDPGVRVVILKALCDIRVEQEDIRSYIDHSLKHGVQFSTFRKERIGGDSQGISYWYEDDPIIGHRLYREIRKTEVKEVKKGKTKGSQVLPRTTYQWEAVATNFDEFQDVSEKLFSSKNRTEASLGKKLKNDMLPEIEKVHKRKERLLKKQHRQALLLDNFLVVDGLAPGRSLRDRKPVTYTFDDYDRSINEAIKITKKKQPSPEPMPSREVVAKPEGLPNGKWNGSPHAPQHISFHMSSPKSPDYDDEEEEDHKDEELDRSNRRRQRPQRYSEKEFVEALSDNEADFDSDDDIVGEAIYDEEYLRKRKQRKKLSSSSEGDEEYQWDEENGEEEEEEYDDEDSLSISEDSVEPRKVKKLPGRTRRETKLRSVDEIQSGLRRSKRASRNRINYRQYEMSESETESMKPEKSNATDDHSEASENGEYMMDSEDTDNGNDDHDEMEVENPVAYPEVKEKEKQPPEKSSSPPGQDEVEGMGKRRFLDLNELAPSSGFDDGPNTIMKDEDKNDY 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00427 728 MobiDBLite consensus disorder prediction 518 539 - -
Bva05g00427 728 MobiDBLite consensus disorder prediction 643 659 - -
Bva05g00427 728 Pfam DDT domain 127 172 IPR018501 -
Bva05g00427 728 MobiDBLite consensus disorder prediction 613 642 - -
Bva05g00427 728 MobiDBLite consensus disorder prediction 540 565 - -
Bva05g00427 728 MobiDBLite consensus disorder prediction 476 501 - -
Bva05g00427 728 PANTHER REMODELING AND SPACING FACTOR 1 33 727 IPR028938 GO:0006355|GO:0031213
Bva05g00427 728 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 33 727 - -
Bva05g00427 728 MobiDBLite consensus disorder prediction 660 681 - -
Bva05g00427 728 MobiDBLite consensus disorder prediction 566 600 - -
Bva05g00427 728 MobiDBLite consensus disorder prediction 1 110 - -
Bva05g00427 728 MobiDBLite consensus disorder prediction 415 728 - -
Bva05g00427 728 MobiDBLite consensus disorder prediction 1 68 - -
Bva05g00427 728 MobiDBLite consensus disorder prediction 502 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00427 Bva-Chr5 2103124 2109333 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Bva05g00427 DDT 3.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00427 - - zju:107418497 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00427 05 2103124 2109333 Bva06g01279 06 9737314 9743807 BWGD
Bva05g00427 05 2103124 2109333 Bva05g00427 05 2103124 2109333 ECH