Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00424 ATGGTTTGGACTGCAGAGGAAGTTGTCTCAAAGCATGGATCTAGTAACTGGACTGCTGTGCCGAAAAAAGCAGGTCTTAAGAGGTTTGGAAAGAGTTGCAGGCTTAGGTGGGCTAACCACCTCAGACCTGACCTTAACAATGATAGCTTCACTCCACAAGAAGAGGATTTACTCGTCAAGCTTCATGCAGCTATAGGTAGCAGGTGGTCTATAATAGCCCAACAGCTACCTGGGAAGACAGACAATGATGTCAAGAACCACTGGAACACCAAGCTGAAAAAGAAGCTTTCTGACATGGGAATAGATCCTGTTACCCACAAGCCCTTTTCTAAACTCCTTGCTGACTATGGAAACATTGGTGGTGTCCAGAAACCAAGTACAAGAACTGGGTCTCTCAGTAAAGACTTCAAGAATGCAATTCTGTTGAAATCAAACCCTTACCCAATCCCATCACAAGGACAGAGAAATATGAAGAGCCAAACATCATTATTACCCAAAATGGAACCAACTGAAAATAGCTTTTTTCATAACAAAAACTATACTGATATAGATCTTGCCCAGTTTCAAGTCCCCATATCTGGTGAAGGTTGCTTGCCATCAACTCCATCaccatcatcttcatcttcaacttATTCCACTGAAAATTTGCCTCTGCCCTTCTGTTGGAATGACTTTCTTCTTGAAGATGCTTTTCCAGCTGCTGCTGATAACCAAGAACAAGAAACCATGCCTGCTTTCCTGTCAAAGGACTTTGTGAGCCAAATAGAGAATGTGATACAACAAAGTGAGAATAAGAAAGAGGTGATCAGCTCACACCAAAACCCAGCCACTGACTTACAGCTTTCATCATCCTCTGAATTTTCATTCCTGGAAGCCATgttaaatcaagaaaatgatatGTTTCTAAATTTTCCCCACCTTATGGAGGAACCACCCAGCCATTG 944 0.4078 MVWTAEEVVSKHGSSNWTAVPKKAGLKRFGKSCRLRWANHLRPDLNNDSFTPQEEDLLVKLHAAIGSRWSIIAQQLPGKTDNDVKNHWNTKLKKKLSDMGIDPVTHKPFSKLLADYGNIGGVQKPSTRTGSLSKDFKNAILLKSNPYPIPSQGQRNMKSQTSLLPKMEPTENSFFHNKNYTDIDLAQFQVPISGEGCLPSTPSPSSSSSTYSTENLPLPFCWNDFLLEDAFPAAADNQEQETMPAFLSKDFVSQIENVIQQSENKKEVISSHQNPATDLQLSSSSEFSFLEAMLNQENDMFLNFPHLMEEPPSH 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00424 314 CDD SANT 49 92 IPR001005 -
Bva05g00424 314 ProSiteProfiles Myb-like domain profile. 42 92 IPR001005 -
Bva05g00424 314 PANTHER F14D16.11-RELATED 3 311 - -
Bva05g00424 314 PANTHER F14D16.11-RELATED 3 311 - -
Bva05g00424 314 CDD SANT 3 41 IPR001005 -
Bva05g00424 314 Gene3D - 48 108 - -
Bva05g00424 314 Pfam Myb-like DNA-binding domain 49 90 IPR001005 -
Bva05g00424 314 Pfam Myb-like DNA-binding domain 7 41 IPR001005 -
Bva05g00424 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 41 IPR017930 -
Bva05g00424 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 96 IPR017930 -
Bva05g00424 314 SUPERFAMILY Homeodomain-like 2 88 IPR009057 -
Bva05g00424 314 ProSiteProfiles Myb-like domain profile. 7 41 IPR001005 -
Bva05g00424 314 Gene3D - 3 46 - -
Bva05g00424 314 SMART sant 2 43 IPR001005 -
Bva05g00424 314 SMART sant 46 94 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00424 Bva-Chr5 2092276 2093666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00424 2 310 MYB Transcription Factor Family AT3G28470 39.688 6.71e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva05g00424 Myb_DNA-binding 5.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00424 K09422 - jre:108990168 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00424 05 2092276 2093666 Bva05g00424 05 2092276 2093666 ECH