Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00419 ATGCCGCCCCATTCCGACCTTGACCGTCAGATCGAGCACTTGATGCAGTGCAAGCCTCTATCGGAGTTGGAAGTGAAGACGCTATGCGAGCAAGCTAAGTCTATTTTGGTAGAAGAATGGAATGTGCAGCCGGTGAAGTGCCCGGTCACTGTATGTGGAGATATCCATGGGCAGTTCCACGATCTCTTGGAGCTGTTTCGAATCGGAGGAAATCCGCCTGATACCAATTATCTTTTCATGGGCGACTACGTAGATCGAGGATACTATTCCGTGGAGACTGTCACGCTTCTTGTGGCTCTAAAAGTACGTTATAGAGATAGAATTACCATTCTAAGAGGAAATCATGAGAGTCGGCAAATAACTCAAGTATATGGATTTTATGATGAATGCTTGCGAAAATATGGAAATGCTAATGTCTGGAAGTATTTTACTGAACTTTTTGATTACCTACCACTTACAGCCTTGATTGAGTCTCAGattttctgCTTGCATGGAGGCCTTTCTCCCTCTTTAGATACACTAGACAATATCCGTGCTTTGGACCGTACACAGGAGGTTCCTCATGAAGGCCCCATGTGCGACCTCCTGTGGTCTGATCCTGATGACCGGTGTGGGTGGGGAATATCTCCTCGTGGTGCAGGATACACATTTGGTCAAGATATCAGCTCACAGTTTAACCATACCAATGGGCTCTCTCTTATCTCTCGAGCTCATCAGCTTGTTATGGAAGGCTACAATTGGACGCAGGAAAAGAATGTGGTAACTGTGTTTAGTGCTCCAAACTATTGCTACCGCTGTGGTAATATAGCTGCAATTTTTGAGGTTGGAGAGAATATGGAGCAGAACTTTATACAATTTGATCCAGCACCTCGTCAGATTGAACCTGAAACCACACGAAGAACCCCAGACTACTTTTTGTG 920 0.4489 MPPHSDLDRQIEHLMQCKPLSELEVKTLCEQAKSILVEEWNVQPVKCPVTVCGDIHGQFHDLLELFRIGGNPPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTELFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRTQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISSQFNHTNGLSLISRAHQLVMEGYNWTQEKNVVTVFSAPNYCYRCGNIAAIFEVGENMEQNFIQFDPAPRQIEPETTRRTPDYFL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00419 306 ProSitePatterns Serine/threonine specific protein phosphatases signature. 111 116 IPR006186 GO:0016787
Bva05g00419 306 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 1 306 - -
Bva05g00419 306 SMART pp2a_7 20 290 IPR006186 GO:0016787
Bva05g00419 306 PRINTS Serine/threonine phosphatase family signature 252 268 IPR006186 GO:0016787
Bva05g00419 306 PRINTS Serine/threonine phosphatase family signature 48 75 IPR006186 GO:0016787
Bva05g00419 306 PRINTS Serine/threonine phosphatase family signature 230 250 IPR006186 GO:0016787
Bva05g00419 306 PRINTS Serine/threonine phosphatase family signature 145 171 IPR006186 GO:0016787
Bva05g00419 306 PRINTS Serine/threonine phosphatase family signature 110 134 IPR006186 GO:0016787
Bva05g00419 306 PRINTS Serine/threonine phosphatase family signature 77 104 IPR006186 GO:0016787
Bva05g00419 306 PRINTS Serine/threonine phosphatase family signature 174 201 IPR006186 GO:0016787
Bva05g00419 306 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-5 CATALYTIC SUBUNIT 1 306 - -
Bva05g00419 306 SUPERFAMILY Metallo-dependent phosphatases 5 293 IPR029052 -
Bva05g00419 306 CDD MPP_PP2A_PP4_PP6 6 290 - -
Bva05g00419 306 Gene3D - 3 306 IPR029052 -
Bva05g00419 306 Pfam Calcineurin-like phosphoesterase 48 239 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00419 Bva-Chr5 2074208 2074483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00419 49 225 Calmodulin-binding Proteins AT5G63870 37.850 2.95e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00419 K04382 - tcc:18507049 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01286 06 9766506 9770134 Bva05g00419 05 2074208 2074483 ECH
Bva05g00419 05 2074208 2074483 Bva05g00419 05 2074208 2074483 ECH