Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00414 ATGTCTCGCCCGAGCGCTGTCGCAGACTCCACCATATCCTGCGACAGAAATGGTGCTCCCACCGCCGCTGGAGAGTTCATGCTGTTTGGGGTTAGAGTTGTCGTTGATTCGATGAGAAAGAGTGTCAGTATGAACAATCTTTCGCAGTACGAGCTTCCTCAGGATGCCTCAAATAACAATAACAGCAATAAAGAAGATGCACTCACCGCCGGTTACGCTTCCGCCGATGACACTGTTGCTCACAATTCCGGCGGGCATCGCGAGCGTGAGCGTAAGCGAGGGGTTCCATGGACGGAGGAAGAGCACAAGTTGTTCTTGCTGGGATTGCAGAAAGTGGGGAAAGGGGATTGGAGAGGGATCTCCAGGAATTACGTGAAAACCAGGACGCCGACACAGGTTGCTAGCCATGCTCAGAAATACTTTCTCCGACGGTGCAACCTTAATCGCCGACGCCGCAGATCAAGCCTCTTTGATATCACCACTGACACGGTCGCGGCGATCCCAATGGAAGAAGAACAGATCCAGCGTCAAGATAACGTGTCTCGTTCACATCCTGTGTGTCCTGCAACCCCCGAAACTAGCAACCTTAATGGATTCCCTATGATGCCAATATACCCAATGGGTGTTGGTTCTGGCATGATATCGGTACCCGTTGGGAATGCAGTGGAAAATTTCACTTTTGGACAAGGAAATGTAGAACACAATGGGTCAACCAAGCTAGTCCGTCCAATTCCAGCTGTTCCAGATCCTAAAGCTTCTACAGTTTCTGATATCACCTCAAGCTCGAGTTCAGCTATGGATCCACCAATGCTGTCTCTCAGGTTATCTTTGTCATCTAGTCAGATAGAGACATCGTCCAGGCATTCAGCTTTACATGCAATCCCAAGTTTCAACAATGGAGATAGCATCATAAGTGTTGCTTA 923 0.493 MSRPSAVADSTISCDRNGAPTAAGEFMLFGVRVVVDSMRKSVSMNNLSQYELPQDASNNNNSNKEDALTAGYASADDTVAHNSGGHRERERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRCNLNRRRRRSSLFDITTDTVAAIPMEEEQIQRQDNVSRSHPVCPATPETSNLNGFPMMPIYPMGVGSGMISVPVGNAVENFTFGQGNVEHNGSTKLVRPIPAVPDPKASTVSDITSSSSSAMDPPMLSLRLSLSSSQIETSSRHSALHAIPSFNNGDSIISVA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00414 307 MobiDBLite consensus disorder prediction 253 269 - -
Bva05g00414 307 CDD SANT 96 141 IPR001005 -
Bva05g00414 307 SMART sant 93 143 IPR001005 -
Bva05g00414 307 Pfam Myb-like DNA-binding domain 96 141 IPR001005 -
Bva05g00414 307 SUPERFAMILY Homeodomain-like 91 143 IPR009057 -
Bva05g00414 307 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 20 307 - -
Bva05g00414 307 ProSiteProfiles SANT domain profile. 92 146 IPR017884 -
Bva05g00414 307 Gene3D - 95 147 - -
Bva05g00414 307 ProSiteProfiles Myb-like domain profile. 89 141 IPR001005 -
Bva05g00414 307 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 92 143 IPR006447 GO:0003677
Bva05g00414 307 PANTHER KIN2 20 307 - -
Bva05g00414 307 MobiDBLite consensus disorder prediction 245 269 - -
Bva05g00414 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 145 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00414 Bva-Chr5 2048318 2050445 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva05g00414 Myb_DNA-binding 1.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00414 - - aip:107632799 362.073