Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00407 ATGTCAGTATCCGGTGATGCAGTTGCAAAGGCTATTGCTGCTACAGCTGCAGCTATGCTATTTATTGCTGGGgttttcttttacttgttCCACAGATTTGCTATTGCTCGTTGCCGCCAGAGACACAAGGTTGGTGCAAGCTTTCTTCGAGAAGCAGGAGTTAGACGTCAggatataaagaaatttactGACTACGTGAAAGGATTgattgttgaagaaaatgggATTGATATTCTTTATACGATGGAAACAGAGAGTAAGCAACTGAAGACCATATACCCAAATAGCAGACTTAATCCTAGTTATGAAGATGAtgcagaagaaaagagaatagacGTAACTGTTGAAGGATGCAAAAGATCTATGCCTCAGGAAACTCTGATATCTGAGGCTCCAGGCGTGATTGCTCATGTGGATCTTGTTAAACCAGTTTCACAACTGCCCATTCTGCCTTTTTCGGTTTCAGCATCAGTGCCAACAGCAAAAGCCTTGCCACAAACACCTCAGCTACCTCCTCCACCTCCGACTGCACCGCTACCACAACCCTCATCAGTGATTCTTGAGAAGAAAACTCAACCACTTCCACCTGCTCCGCCCCCTcctcctccaccaccaccatccCCTCCGAGAAAAGAAGTTCCAAGAGcacctccacctccacctTCAAAGGGCATTGGTCCAATTTCACCTTTGAAACCCCCACTTGCACCTAAAGAGAAATCAAACTTCAAGAACACCAGAGGGGCTACGGCAGGGGAGAGCTCAAGAGAGAATGATTCTGGCCAAACCAAGCTGAAGCCTCTACATTGGGATAAGGTCGTAGCAACTATTGATGAGTCAACAGTGTGGGATCAGATCAATGATGGTTCTTTCCGGTTTGATAATCGACTCATGGAGACACTCTTTGGATATTCAGCCAGCGATGAGCATcatataagagataaaagaatTTCAACTTCAACTAGGTCCAACTCCAACCAACCTGCCCAAATATTCATTCTGGAGGCAAACAAATCCCAGAACACAGCAATTGTGCTAAAATCTCTCGCTATTTCTCGCAGAGAAATTCTGGATGCACTCCTTGATGGCCAGGGACTCAGTGCTGACACACTTGAGAAACTCACCAAAATAGCTCCAACTCAAGAAGAAGCAGCCAAAATCTTGCAGTTCAAGGGAAGCCCAGATAAACTTGCAGATGCTGAGTCTTTCCTCTACTACATTCTGAAAGAAGTTCCAACAGCATTCACTCGTTTAAAGGCCATGTTATTCAGATCAAACTATGATTGTGAAGTGCTTCAGCTTAAAGCATACCTAAAGACACTAGAGTTGGGGTGTAAGGAGCTGAGAACAAGTGGTCTCTTTCTGAAACTCCTTGAGGCCATTCTCAAAGCTGGGAACAGAATGAATGCTGGAACTTCAAGAGGCAATGCACAAGGTTTCAACCTCAGTGCTCTCAGAAAGCTTTCTGATGTGAAAAGCACTGATGGAAAGACTAATTTGCTACACTTTATTGTGGAACAAGTAGCTCAGTCAGAAGGTAAACGAAAAGCTATCTATCAAAACCACAATCTCCACAGAAGCAAAAATTATGGATCAAATTCAGATAGCTTGACTCAACAAGAAAGAGATACAGAGTATCAAATGCTTGGATTAACAGTACTAGGAAGCCTAAGCAATGAGTTATCTCAAGTAAAGCGAGCAGCCAGCATAGATTATCACAGCTTCATCAATATGTATTCCACTCTCGACGCTCATGTTACTGAAATTCAACAGATTATAACACACTGTGGCAACGGTGAGAGAGGAGAATTCTTCAAGGAAATGAAAGGGTTCCTGGAAGAATGCGAGGATGAGCTTAAGGAGGTAAGTGAGGAGAAAACAAGGATCATGGAGCTTGTGAAGAGAACCAACGAGTATTATCTAGCAGGAATGTACAAACACCATATGTCAAACCCCTTTCAGTTGTTTCTCATTGTGAAAGATTTTGCTGACATGGTAGATCAAGAATGCACAGTACTTAGAAAAAAgctagaaaagaagaatgttGGAGTAGAAGCTGCATCAATACCACCTTTTTCACCATCAAACAAGGCATCCTTGAGATTCCCTAACTTTGAAATACATTATCTGTCAAACATGGCACAGACAGCATCTTTCACCCAATCAGATGATGATTTTTG 2180 0.4005 MSVSGDAVAKAIAATAAAMLFIAGVFFYLFHRFAIARCRQRHKVGASFLREAGVRRQDIKKFTDYVKGLIVEENGIDILYTMETESKQLKTIYPNSRLNPSYEDDAEEKRIDVTVEGCKRSMPQETLISEAPGVIAHVDLVKPVSQLPILPFSVSASVPTAKALPQTPQLPPPPPTAPLPQPSSVILEKKTQPLPPAPPPPPPPPPSPPRKEVPRAPPPPPSKGIGPISPLKPPLAPKEKSNFKNTRGATAGESSRENDSGQTKLKPLHWDKVVATIDESTVWDQINDGSFRFDNRLMETLFGYSASDEHHIRDKRISTSTRSNSNQPAQIFILEANKSQNTAIVLKSLAISRREILDALLDGQGLSADTLEKLTKIAPTQEEAAKILQFKGSPDKLADAESFLYYILKEVPTAFTRLKAMLFRSNYDCEVLQLKAYLKTLELGCKELRTSGLFLKLLEAILKAGNRMNAGTSRGNAQGFNLSALRKLSDVKSTDGKTNLLHFIVEQVAQSEGKRKAIYQNHNLHRSKNYGSNSDSLTQQERDTEYQMLGLTVLGSLSNELSQVKRAASIDYHSFINMYSTLDAHVTEIQQIITHCGNGERGEFFKEMKGFLEECEDELKEVSEEKTRIMELVKRTNEYYLAGMYKHHMSNPFQLFLIVKDFADMVDQECTVLRKKLEKKNVGVEAASIPPFSPSNKASLRFPNFEIHYLSNMAQTASFTQSDDDF 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00407 726 MobiDBLite consensus disorder prediction 243 258 - -
Bva05g00407 726 SUPERFAMILY Formin homology 2 domain (FH2 domain) 200 680 - -
Bva05g00407 726 Coils Coil 605 632 - -
Bva05g00407 726 Pfam Formin Homology 2 Domain 258 666 IPR015425 -
Bva05g00407 726 MobiDBLite consensus disorder prediction 192 234 - -
Bva05g00407 726 MobiDBLite consensus disorder prediction 163 265 - -
Bva05g00407 726 PANTHER FORMIN-LIKE PROTEIN 4 720 - -
Bva05g00407 726 ProSiteProfiles Formin homology-2 (FH2) domain profile. 255 692 IPR015425 -
Bva05g00407 726 MobiDBLite consensus disorder prediction 165 181 - -
Bva05g00407 726 PANTHER FORMIN-RELATED 4 720 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bva05g00407 726 SMART it6_source 255 681 IPR015425 -
Bva05g00407 726 Gene3D Formin, FH2 domain 278 687 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00407 Bva-Chr5 2010043 2012935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00407 8 726 FH2 protein (formin) Gene Family AT1G70140 41.263 2.58e-156 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00407 - - gsj:114409782 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01298 06 9831232 9832152 Bva05g00407 05 2010043 2012935 ECH
Bva05g00407 05 2010043 2012935 Bva05g00407 05 2010043 2012935 ECH