Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00406 ATGGCTACCGTTGGCGATGTTTTGAGGCAGAATTTGCCTCATATATTAGAGGAATCGCCTTCTGGTTCAGGGGAATTGCATGTTCTGGCCGTTGATGATAGTCATGTGGATCGTAAGGTCATTGAACGGTTGCTAAAAATCTCATCGTGCAAAGCGACTGTGGTAGACAGTGGAACCAGAGCTCTGCAATATCTGGGGTTGGATGGAGAGAAGAACTCCGTTGCGTTCGATAGTGTGAAGGTTAATCTGATAATGACGGACTATTCCATGCCAGGGATGACAGGATATGAACTTCTCAAGAGGATCAAGGAGTCATCAATTTTCAGAGAGATCCCAGTGGTGATCATGTCCTCTGAGAATATATTGACTCGAATTGATAGTTGCTTGGAGGAAGGAGCAGAAGATTTTTTGTTGAAGCCGGTAAAATTGGCAGATGTGAAACGCTTGAAAGATTGCATCATGAGAGGTGAAGGGAGGGAAAGCAGAGAGGGAAGATCTCAGAAAAAAAGACGGTCAGATGATTATAGTCCATCTCTATCAACTCCATTCTCATCAATGTCTCATCCCTGCGATCCATCATCGCCTTCATTGCCCTCTAAGAAATCTAGATTATG 614 0.4397 MATVGDVLRQNLPHILEESPSGSGELHVLAVDDSHVDRKVIERLLKISSCKATVVDSGTRALQYLGLDGEKNSVAFDSVKVNLIMTDYSMPGMTGYELLKRIKESSIFREIPVVIMSSENILTRIDSCLEEGAEDFLLKPVKLADVKRLKDCIMRGEGRESREGRSQKKRRSDDYSPSLSTPFSSMSHPCDPSSPSLPSKKSRL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00406 204 MobiDBLite consensus disorder prediction 176 204 - -
Bva05g00406 204 CDD REC_typeA_ARR 28 149 - -
Bva05g00406 204 SMART REC_2 26 153 IPR001789 GO:0000160
Bva05g00406 204 ProSiteProfiles Response regulatory domain profile. 27 154 IPR001789 GO:0000160
Bva05g00406 204 SUPERFAMILY CheY-like 25 149 IPR011006 -
Bva05g00406 204 Pfam Response regulator receiver domain 28 146 IPR001789 GO:0000160
Bva05g00406 204 MobiDBLite consensus disorder prediction 157 204 - -
Bva05g00406 204 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 11 203 - -
Bva05g00406 204 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 203 IPR045279 GO:0009736
Bva05g00406 204 MobiDBLite consensus disorder prediction 157 175 - -
Bva05g00406 204 Gene3D - 26 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00406 Bva-Chr5 2007632 2010042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00406 4 179 Response Regulator Gene Family AT3G48100 66.480 9.53e-78 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva05g00406 Response_reg 8.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00406 K14492 - gmx:100306152 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01299 06 9834684 9836717 Bva05g00406 05 2007632 2010042 ECH
Bva05g00406 05 2007632 2010042 Bva05g00406 05 2007632 2010042 ECH