Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00396 ATGTCGCACAAGAGGCGCCCCGAAGATGGTAAGGCTAAATCAGATTGTGGTAGTCCTGAAGATAAGCGTAGGAGGGTTCCAGCTTTTCACAATGTGGTGCTTGAGGTGATGAAGCTACATTCAGCTCGGCATTTGCTGGAGCCAGTTCTGGAGCCCTTGATTCGTAGAGTGGTTAAGGAGGAAGTTGAATTGGCCCTAAAGAAGCATTTAACCAGCATGAAACAgaCCTATGGAAAGGAGGTACATACTCCTGAATCAAGAAGCTTGCTACTACAGTTTGAAAGCAGCATCTCTCTTCCAGTCTTTACTGGGGCTCGAATTGAAGCAGAAGATTGCGCCAACTTAAAGATAGGTTTAGTTGATTCCATAACAGGGCAGATTGTTAGTTCAGGACCTGAATCCTCAGCTAAAGTGGAAATTGTAGTCCTTGAAGGTGATTTTGATAGTGATGAAAGTGACATTTGGAAGCCGGAAGATTTCAGGAGCAATATCGTAAAAGAGCGAGAAGGAAAGAAGGCTCTTCTTTCAGGAGATGTAATTTTGTATCTTAAAGACGGCATTGGTACTGTGAGTGAAATTTCATTTACAGATAATTCAAGCTGGACAAGGAGTCGCAAGTTCAGGCTTGGGGCAAGAGTTCTTGATGTCTTTGATGGAATTAGAATAAGAGAAGCAAAGACAGAGTCATTTATTGTCAGGGACCACAGAGGAGAATTGTACAAGAAGCATCATCCTCCTAATCtgtttgatgaagtttggagaCTGGAAAAGATTGGCAAAGAGGGAGCTTTCCACAAGCGTTTGAGTCGGGAAAGGATCCATACTGTGAAGGATTTTCTCATACTACTCAATCTAGACCCGGCCAAGCTACGAAGTATACTGGGCACAGGTATGTCCACAAAGATGTGGGAAGTAACAGTGGAGCATGCTCGAACATGTGTACTTGATTCCAGGAGGCACCTCTACTTCCCTCCTCAGTCTGAACCAAAAACTGGTGTTGTTTTCAATGCCGTGGGACAAGTGACGGGGCTTCTTTCGGAATGCCAGTATGTCCCTGTGGATAAGCTGTCTGAAACTGAAAAGGTTGATGCTCAAAACCTGGtattttctgcatttaaaCAATTGGAGGGTGTTGTCTCTTATGAAGATGAGAACTCTCTTATGGATGGATTTTCACAGCTAACAAATGTATATTACACCTCAACTTCATCGCGAACTGAGGGATCTAGTGCCAGCAGACTTTTGACTCCCCAGAAGACTGCAGGATTTGATTATACTCAAGCAAGTGCTTCTTCACCAGATATCATGTCATCTATCTATTCCGTTGGTGCAACTAGTGGCATGGATGATTTTTGCTTGCAGAACATTGACAACTTGGGTCTTAGATATGACCCTTCTCTCAGTTTTCCAGTTCAAGTTGGAAGCTCTTTGATCTGTGACTCGGATCCCATGATCCATACTTTTGACGATGAAGATCATCTACAAATTTTTGACAATGATCTTCAGTCTCATAGCCACATTCTGGAATCCCGAGCAGATTTACAGAGTGCTGTTGATGGCTTCCTACTGGCGCAATCTACTGTTAAGGCTCAGAGGAGATGGAGAAAGCTTTTCAATGTACTAAAGTGGTTCATGCTTAGGAAGGTTGGAGAAAGAATTCACCGTCGCCAAATACAGTA 1679 0.4258 MSHKRRPEDGKAKSDCGSPEDKRRRVPAFHNVVLEVMKLHSARHLLEPVLEPLIRRVVKEEVELALKKHLTSMKQTYGKEVHTPESRSLLLQFESSISLPVFTGARIEAEDCANLKIGLVDSITGQIVSSGPESSAKVEIVVLEGDFDSDESDIWKPEDFRSNIVKEREGKKALLSGDVILYLKDGIGTVSEISFTDNSSWTRSRKFRLGARVLDVFDGIRIREAKTESFIVRDHRGELYKKHHPPNLFDEVWRLEKIGKEGAFHKRLSRERIHTVKDFLILLNLDPAKLRSILGTGMSTKMWEVTVEHARTCVLDSRRHLYFPPQSEPKTGVVFNAVGQVTGLLSECQYVPVDKLSETEKVDAQNLVFSAFKQLEGVVSYEDENSLMDGFSQLTNVYYTSTSSRTEGSSASRLLTPQKTAGFDYTQASASSPDIMSSIYSVGATSGMDDFCLQNIDNLGLRYDPSLSFPVQVGSSLICDSDPMIHTFDDEDHLQIFDNDLQSHSHILESRADLQSAVDGFLLAQSTVKAQRRWRKLFNVLKWFMLRKVGERIHRRQIQ 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00396 559 Pfam Calmodulin binding protein-like N-terminal domain 91 235 IPR046831 -
Bva05g00396 559 Coils Coil 559 559 - -
Bva05g00396 559 PANTHER OS02G0177800 PROTEIN 1 552 IPR012416 GO:0005516
Bva05g00396 559 Pfam Calmodulin binding protein C-terminal domain 320 381 IPR046829 -
Bva05g00396 559 MobiDBLite consensus disorder prediction 1 22 - -
Bva05g00396 559 Pfam Calmodulin binding protein central domain 248 313 IPR046830 -
Bva05g00396 559 PANTHER CALMODULIN-BINDING PROTEIN 60 A 1 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00396 Bva-Chr5 1954669 1958848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00396 1 361 Calmodulin-binding Proteins AT5G62570 63.989 2.52e-162 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00396 - - gmx:100793156 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00396 05 1954669 1958848 Bva05g00396 05 1954669 1958848 ECH