Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00389 GTACACCTTGCCTTTTGGCCGTGTACTTCTCTCTCTAAGTTTCTCTGTCCTGATTTTTGCTCTTAAGATCGAAAGGCGGCTTCTAATTCGCGCATGTATTTCTTCGTTGGATGGATCTGAGCTTCAATTCGATCGCTTTATCCGTAAAGGAAAGCCGGGAAATTTTAGAGGgattctaatttttgcaagcaTTAGGGTTCCGTATGCTTTGGCTGAGATGTGGCTGGAATTAGGGTTTTTGATGGATCTAGGGTTTCGCGGAGCTGTAAATGGAAGAATTTGAAGTGGGTTGGGCTTCGTCGTGGAATTAATGTGGGATTGATGGTACTCGTGAGGTGTGAAAGTGGGATCGAAGCGCAAATTGGGGAAAATGCAAGGCTATGCGTGGGAGTGGAGGTGAGGAGAGGAAAAAGAGTCGGCACATGTGGATAACCCCCACATGCGGCAACCAAATTGTAAGCGCTCCTACCGatgtctcttcttcttcatcgtCGACAGCTAATTCATTCTGTAAGGACGGTCGCAAAATCAGTGTCGGTGACTGTGCTCTTTTTAAACCAGCTCAAGATTGCCCTCCTTTCATTGGAATAATTCGTTGGCTGACTACTggtaaagagaataaattgaAGTTAGGTGTTAATTGGCTCTATCGACCTGCTGAAGTAAAACTTGGCAAGGGTGTCCTATCCAACACTGCACCAAATGAAGTTTTCTACTCCTTTCATAAGGATGAAATTCCTGCGGCATCACTTATACATCCTTGTAAAGTTGCATTTCTTCCTAAAGGTATCGAACTTCCATCAGGGATTTCATCATTTGTGTGTTGGAGGGTTTATGACGTTGTGAACAAGCGTTTACAGTGGCTAACTGATCAAGATTATATTAATGACCTTCAAGAGGAAGTAGATCAATTGTTATACTTGACTCGTATAGAAATGCATGCAACAGTGCAGCCCGGTGGTCGATCTCCTAAGCCAATGAGTAGTCCAACATCAATATCACAGTTAAAATCAGGTTCAGATAGTGTTCAGAACCGTGcctcttcctttccttctcaAGTTAAGGGCAAGAAAAGGGAGAGAATTGATCAAGGATCTGAGCCTGTGAAGCGAGAACGTACAATAAAAACTGAGGATGGAGACCCCAGTAATTTTAGGCAGGATAGCATTTTAAAGAACGAGATTGCAAAAATTACTGAAAAGGGAGGGCTCGTAGATACTGAAGGggttgaaaaattattacagCTCATGGTTCCAgatagaaatgagaaaaagatagatttggctaGCCGGTCAATGCTTGCAGCTGTTATTGCAGCAACAGATAACTTTGACTGTCTTAGTCGGTTTGTGCAGTTGAGGGGTTTGACTGTATTTGATGAATGGCTCCAAGAGGTTCATAAAGGGAAGATTGGTGATGGTGATAAATCCACTGAGGAATTTCTCTTGGTATTACTTCAGGCACTTGATAAGCTTCCTGTAAATCTTCAGGCTCTGCAGACATGTCCTATTGGCAGATCTGTGAATCATTTGAGAAGTAATAAAAACCCTGAAATCCAGAAGAAATCTAGGGGCTTAGTTGACACATGGAAAAAACGTGTTGAAGTTGAATGGAATATGAATGATGCAAAGACTGGTTCTGGTCAGGCTGTCCCCTGGAGTTCCAAACCACGCCTTCCTGAAGTGGCTCAAAGTGGAATTAGACATTCTAGTGGGTCATCTGATGTTGCCACAAAGAGCTCAGTTACTCAGGTTTCTGCATCCAAAACTGCTTCTGTGAAGATTGTCCAGGGAGAGAATACTACAAAATCTGCACCAACATCTGGATCTCCTGGATCTATGAAATCAGTGCCTTCCCCTGCATCTGCAACCATGAACTTAAAGGATGGACAGCCCCATGGTTCTCCTGCTAGTGGAGCTTCTGATCTTCCAACAACAAATACAAGGGATGAAAAAAGTAGCAGTTCTAGTCAATCTCACAACAACAGTCAATCTTGTTCTAGTGATCATGCTAAAACTGGGGGTTTTTCAGGAAAAGAGGATGCTAGGAGCTCTACTGCAATGAGTGTAAGTAAGATATCAGTCAGTTCTTCACTGTATCGGAAGTCTAATAATGGATTCCCTGGTTCAAATTCATCTGGTGGCCTAAGGGAGACTGTATCAAGCAGAAATTCTTCCCTGcacaaaatttcaacttcaGAAATATTACCACAATCGGGATTAGCTTGCGAAAAGGCACTTGATGGTCCTTCACTTGAGGGGAATACTCACAAGCTGATTGTTAAGATCCCAAACAGAGGTCAGAGTCCCACACAAAGTGCCAGTGGAGGTTCTTTTGATGATCCTTCAATCATGAATAGTCGGGCTTCATCTCCTGTCCTTCCAGAGAAGCAAGATCAGTTTGAGCGTAgttcaaaagaaaagtgtgATTTTAATCGAGCTAATATTGGCTCAGATGTTAATACTGAATCCTGGCAGAGTAATGATTTCAAAGATATATTGACTGGGTCTGATGAGGGTGATGGCTCACCTGCTACTGGTACCCATGAAGAACGCTGTAGAACTTCTGATGATTCTAAGAAAATATCAGAAGTATCAAAAACTGCTTCCTCATCATctggaaatgaaaataaagcagGGAATTTGCAGGATGCTTCTTTCAGTTCCATTAATGCATTAATTGAAAGTTGTGTCAAGTATTCTGAAGGTAATGCTTCTACATCGATTGCAGATGATGTTGGAATGAATTTGCTTGCAAGTGTCGCTGCTGGAGAAATCTCCAAATCTGAATTGGTCTCACCAGCTGGATCCCCAGAAAGGAACACTGCCACAGTTGAACAGTCCTGTGCAGGTGACGCTAAAGTCAAGTCTTCTGAAGAAGACCTTGTTAGAGATGAGTGTCACTTGAATGATGGTCCTGATGATGAACATAAGAGACGGGGTATATCTGGTGATTTAGGGAAAAGCAATGATGGTAAAGCGTCAGAAGGGCATAATAGGCATGTCAATTCGTCTTCTATGGATTTGCGGCAGGGTACTAATGTCTGTtcagaaaacaaaggaaaacaagATGAAAAGCCCGGTGCTGCTTCGGGGGCTGCCTTTCCTGAAAGTATTACTCAAGAAGCCAGAGACAGTGACAGTAGCAAACTTCTCAAGGAGAAAATGTTTGTTGGAGGAGTAAACACCAGTGGAAATCTTGATGTTGGGGTTAGTCAAGTCTCTAGTGAGACTAAGATGGACGGAGTTGAAAAAGCATCACCATTCCCCTCCTTAGAGGCTGATGTGAAGGCTGATACTTACACTACCGAGGGATTAAGCAATTCTGGACAGACAGCTCCAAAGCCTCCATCCATTCTTACACCATCCAACTCAGAAAAAGAGGTGGATGAAAATGTACCCCAACCTTCTGCTGTTAGTGTTGATAAGTTTGCTGAAGACCTGAATGAATGTGAAGCCGGAAAGACTGATGATATGTCTGCTCAGGTACCTGCTAgtcaatttgaaaatcaaagaaacaaagcaGAAAGTAATACTCTAGCAATGCCTGAGAATAGAGGTAAAATTGGCTTAGGTTCAGATGTTACTGGTCGTGCTGCTGAGCATGTGGAGGAGAGTTCAGAAACAAAAGAGGTTCATGATGATGAGTCAGGCCTGCACCAAGTTTTGCCTAACTTTCCTTCAAAAGAAACAGATTTGGATTCTAAAGGATCTAAATTGACTCCCATGGAAACAGAAGAAGCTGAAGAATGCACCTCTACCACTGCTGATGCTTCTTCCATGTCTGCTGCTTGTGTGTCAGACATGGATGCAAAAgttgaatttgatttgaatgaaGGTTTCAATGCAGATGATGAAAAATGCAGTGAGTTTAATAGCATTTCCAGTTCCACACCCCGATCTGCAACTGCTGTACGATTGGTCAGTCCAGTGCCATTTCCTGCTTCATCCTTGTCTGCTGGAATTCCTGCCTCAATTACTGTGGCTGCTGCTGCAAAGGGGCCCTTTTTGCCCCCAGAAGATTTACTAAAAAGTAAAGGGGAGCTTGGTTGGAAGGGATCAGCAGCCACTAGTGCGTTCCGACCTGCAGAGCCAAGAAAAGTTGCGGAAATGCCACTAGGTACACCAACTACCACAATTCCTGATGCTGCAGCTGCAAAGCAGAGTCGACAACCATTGGATATTGACTTGAATGTGGCTGATGAAAGAATACTAGATGATGCTTCTTCACCCGTTCGCTGCTCTGGAGGACTTGGTCTTGACTTGAACCAGGTGGATGAAGCTTCCGGTGTGGGTAATTGCTCTACAAGCAATAGTCATAAAATGGAGGTACCAATTTTACATGTGAAATCTTCATCTGGTGGTACCCTAAATAGCGAGGTGAGTGTCCGGAGGGACTTTGATTTGAACAATGGACCTGTGGCTGATGAAGTCTGCGCTGAACCATCATTCTTACCTCAGCATGCCAGGAGTGTGACATCTCAACCTCCTGTTTCTGGACTGAGGATGAGTAATGCAGAACTGGGGAATTTATCATGGTTTCCTCCTACTGGGAACACCTACTCAGCTGTCACAATTTCCTCTATTATGCCTGATAGAGTGGATCAGCCCTTTTCAATTGTTGCACCTAATGGACCACAGAGAATACTTTGTTCTGCTACTGGTAGCAGTCCATTTGGACCTGATGTTTATAGGGGACCAGTATTATCTTCTTCTGCTGCAGTGCCATATCCGTCTGCTCCTGTCTTCCCTTTTAATTCCAGCTTCCCTCTTCCATCGGCGTCATTTTCTGGTGGCTCAAGTCCTTATGTAGATTCAACATCCGGTGGGAGGCTCTGCTTTCCTGGAGTAAATTCTCAGTTAATAGGACCTGCTGGTACAGTTTCTTCTCAATTCCCCAGACCTTACGTTGTTAGCCTCACAGATGGTAGCAATAGCAGTAGTTCTGAGAGCAGTAGGAAATGGGGAAGACAGGGTTTAGATCTTAATGCTGGGCCAGGAGGTCCAGACGTAGAGGGGAGAGATGAGAATTCACCTCTCGTTGCAAGGCAACTTTCAATCGCCGGTTCACAGGCCCTAGCTGAGGAGCGAGCAAGGATGTTTCAGCTGGCTGGTAGCattcttaaaagaaaggagCCCGATAGTGGGTGGGATAGCTACAAGCAACCTTCGTGGCAATA 5179 0.4213 MRGSGGEERKKSRHMWITPTCGNQIVSAPTDVSSSSSSTANSFCKDGRKISVGDCALFKPAQDCPPFIGIIRWLTTGKENKLKLGVNWLYRPAEVKLGKGVLSNTAPNEVFYSFHKDEIPAASLIHPCKVAFLPKGIELPSGISSFVCWRVYDVVNKRLQWLTDQDYINDLQEEVDQLLYLTRIEMHATVQPGGRSPKPMSSPTSISQLKSGSDSVQNRASSFPSQVKGKKRERIDQGSEPVKRERTIKTEDGDPSNFRQDSILKNEIAKITEKGGLVDTEGVEKLLQLMVPDRNEKKIDLASRSMLAAVIAATDNFDCLSRFVQLRGLTVFDEWLQEVHKGKIGDGDKSTEEFLLVLLQALDKLPVNLQALQTCPIGRSVNHLRSNKNPEIQKKSRGLVDTWKKRVEVEWNMNDAKTGSGQAVPWSSKPRLPEVAQSGIRHSSGSSDVATKSSVTQVSASKTASVKIVQGENTTKSAPTSGSPGSMKSVPSPASATMNLKDGQPHGSPASGASDLPTTNTRDEKSSSSSQSHNNSQSCSSDHAKTGGFSGKEDARSSTAMSVSKISVSSSLYRKSNNGFPGSNSSGGLRETVSSRNSSLHKISTSEILPQSGLACEKALDGPSLEGNTHKLIVKIPNRGQSPTQSASGGSFDDPSIMNSRASSPVLPEKQDQFERSSKEKCDFNRANIGSDVNTESWQSNDFKDILTGSDEGDGSPATGTHEERCRTSDDSKKISEVSKTASSSSGNENKAGNLQDASFSSINALIESCVKYSEGNASTSIADDVGMNLLASVAAGEISKSELVSPAGSPERNTATVEQSCAGDAKVKSSEEDLVRDECHLNDGPDDEHKRRGISGDLGKSNDGKASEGHNRHVNSSSMDLRQGTNVCSENKGKQDEKPGAASGAAFPESITQEARDSDSSKLLKEKMFVGGVNTSGNLDVGVSQVSSETKMDGVEKASPFPSLEADVKADTYTTEGLSNSGQTAPKPPSILTPSNSEKEVDENVPQPSAVSVDKFAEDLNECEAGKTDDMSAQVPASQFENQRNKAESNTLAMPENRGKIGLGSDVTGRAAEHVEESSETKEVHDDESGLHQVLPNFPSKETDLDSKGSKLTPMETEEAEECTSTTADASSMSAACVSDMDAKVEFDLNEGFNADDEKCSEFNSISSSTPRSATAVRLVSPVPFPASSLSAGIPASITVAAAAKGPFLPPEDLLKSKGELGWKGSAATSAFRPAEPRKVAEMPLGTPTTTIPDAAAAKQSRQPLDIDLNVADERILDDASSPVRCSGGLGLDLNQVDEASGVGNCSTSNSHKMEVPILHVKSSSGGTLNSEVSVRRDFDLNNGPVADEVCAEPSFLPQHARSVTSQPPVSGLRMSNAELGNLSWFPPTGNTYSAVTISSIMPDRVDQPFSIVAPNGPQRILCSATGSSPFGPDVYRGPVLSSSAAVPYPSAPVFPFNSSFPLPSASFSGGSSPYVDSTSGGRLCFPGVNSQLIGPAGTVSSQFPRPYVVSLTDGSNSSSSESSRKWGRQGLDLNAGPGGPDVEGRDENSPLVARQLSIAGSQALAEERARMFQLAGSILKRKEPDSGWDSYKQPSWQ 1599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00389 1599 MobiDBLite consensus disorder prediction 738 755 - -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 511 545 - -
Bva05g00389 1599 SMART BAH_4 48 163 IPR001025 GO:0003682
Bva05g00389 1599 CDD TFIIS_I 343 408 - -
Bva05g00389 1599 Pfam TFIIS helical bundle-like domain 358 407 IPR017923 -
Bva05g00389 1599 Gene3D - 33 274 IPR043151 -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 573 604 - -
Bva05g00389 1599 SMART TFS2_5 336 409 IPR003617 GO:0005634
Bva05g00389 1599 MobiDBLite consensus disorder prediction 1105 1119 - -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 974 1004 - -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 717 737 - -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 1513 1529 - -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 439 504 - -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 638 671 - -
Bva05g00389 1599 Pfam BAH domain 49 159 IPR001025 GO:0003682
Bva05g00389 1599 MobiDBLite consensus disorder prediction 803 921 - -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 672 686 - -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 952 1014 - -
Bva05g00389 1599 ProSiteProfiles BAH domain profile. 48 163 IPR001025 GO:0003682
Bva05g00389 1599 MobiDBLite consensus disorder prediction 1033 1053 - -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 872 891 - -
Bva05g00389 1599 ProSiteProfiles TFIIS N-terminal domain profile. 330 410 IPR017923 -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 414 561 - -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 826 871 - -
Bva05g00389 1599 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 317 420 IPR035441 -
Bva05g00389 1599 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 281 410 IPR035441 -
Bva05g00389 1599 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1599 - -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 636 755 - -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 1028 1128 - -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 807 821 - -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 688 706 - -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 1071 1091 - -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 226 258 - -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 190 259 - -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 195 225 - -
Bva05g00389 1599 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1599 - -
Bva05g00389 1599 MobiDBLite consensus disorder prediction 1513 1551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00389 Bva-Chr5 1919227 1925383 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Bva05g00389 BAH 2.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00389 - - gmx:100788512 2021.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01320 06 9940043 9945812 Bva05g00389 05 1919227 1925383 ECH
Bva05g00389 05 1919227 1925383 Bva05g00389 05 1919227 1925383 ECH