Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00383 ATGATGGCAAGGTCATGTATGAATTTGTTGGACTTGGTTTCAGgggatattttaaatttcccTCCAAGTCCAAGGGCTCTTCCCCGAGTTATGACTGTTCCAGGAATTATCTCTGATGTAGATGGCAAAGAACATAGTGGTGATGATTTATCGGATCCCTCATTAGAATACAGTCAAAAGATAATTGTAGTAGCAAATAATCTTCCTCTCAATGCTCAAAAGGATCAAAACTCTGGCAGATGGTGCTTTAGTTATGAtgaagattcaatttttttgcagCTAAAGGATGGACTCCCTTCTAAAACTAAAGTTGTCTATGTAGGATCACTGGATGTTGATGTTGATGCAAGTGAGCAAGAGAATGTTTCTCTTGAGTTGCTGCAGAAATTCAGTTGTGTGCCTACTTTTCTACCTTCAGAGCTCCAGAAACAGTTTTATGATGGATTCTGCAAGCAAATTTTGTGGACTTTATTCCATTACATGCTGCCCTTGTACCCAGACCATTGCAATCGCTTTGATAGGTCGCTTTGGCAGGCTTATGTTTCTGCTAACAAGATATTTGCAGATAAAGTTAGGGAGGTTATCGATCCAGAATGTGACTATGTATGGATACATGATTATCATCTTATGGTTCTGCCAACATTCCTGAGGAGGCGATACATTCGGGTCAAGTTGGGGTTTTTTCTTCACAGTCCATTTCCTTCATCAGAAATTTATCGGTCTCTGCCAGTTAgagatgaaattttgaaatcattGCTTAATGTAGATTTGATTGGATTTCATACATTTGACTATGCTCGTCATTTTCTGTCTTGCTGCAGTCGGATGCTTGGCTTGGAATATGAATCCAAAAGGGGTTACATTGGGCTTGAATACTTTGGCCGCACAgtatacattaaaatttggcCTGTAGGGATTCATATGAGTAAACTTCAATCTGCCTTGGATCACCCATCTTCTTCTGTCAAAGGCAGAGAAATATATGAGCAATTTAGGGGGAAAAAGCTTATTCTTGGTGTTGATGATATGGACATATTTCAAGGCATCAGTTTGAAGCTCTTGGCCTTAGAAAAACTACTGGAGCAGCATTCCTATCTGAGGGGTGAGCTAATACTGGTCCAAATTGTAAATCCCTCAAGGAGCACTGGCAAAGATGTTgaggaaacaaagaaggagATACACATTACTGCCAAAAGGATAAATGAAAGGTTTGGAACCCCCGGTTATGAACCTGTGATTATCATTGATCATCCTCTTCCTTTTCATGAGAAGACAGCTTATTATGCTTTGGCAGATTGTTGCATTGTAAATGCAGTGAGGGACGGTATGAATTTAATTCCATACAAGTATATTGTCTGTAGGCAGGGGAGtcccaaaatggatgaagccTTGGAAATTGCTTCTGAGTCCCCTCGTACTAGTGCACTTGTTGTCTCTGAGTTCATAGGTTGCTCGCCATCTCTTAGTGGGGCAATCAGGGTGAATCCGTGGAACATTGATGCTGTTTCTGATGCAATGTATTTGGCCATCAGAATGCCCAGTGAAGAGAAGCATTTGCGCCATGAGAAGCACTATCGATATGTTAGCTCTCATGATGTGGCTTACTGGGCCCGGAGTTTTATGCAAGATCTGGAGAGAGCAAGCAAGGACCATTATAGTAAACGTTGCTGGGGCATTGGCTTTGGCATGAGTTTCAGGGTCTTATTCCTTTCCCCTAGTTTTAGGAAGTTGTCCATGGATCACATTGTTTCTGCATATAAGAGGACAAATCAAAGGGCAATATTTTTGGATTATGATGGTACTATTGTGCCTAAAAATTCTATAGTGAAAAGCCCCAGTCCTGAAGTCATATCTGTTCTAAATAACCTCTGCAGTGACACTAAGAACACCGTGTTTATAGTAAGTGGCAGGGGGAAGACCTCATTAGGTGAATGGTTCCATGAGTGTAAGGATCTTGGTATAGCGGCTGAGCATGGTTATCTTATAAGGTGGGGCAAACAGTCAAGTTGGGAAAGCAGCCCCGTAAATACAGATCTTGGTTGGAAAATGATCACTGAACCCGTGATGAGACACTACACTGAGGCAACAGACGGCTCCTATATAGAGGCCAAGGAGAGTGCCTTGGTGTGGCACTACTATGACGCTGCTCATGATTTTGGAACTTGGCAGGCTATTGAGCTGTTGGATCACCTTGAAAATGTCCTTGCAAATGAGCCTGTTATTGTTAAAAAGGGACAGTATATTGTTGAAGTTAAGCCACAGGGGATAACTAAAGGATTGGTCACCGAACAAGTTCTGTCTACACTGACCAACAATGGGAAAACACCAGATTTTGTCTTGTGCATTGGGGATGATAGATCTGACGAGGATATGTTTGAGAGCATATCAACCAAAACTTTTACTTCACCTACAGAAATCTTTGCATGCACAGTTGGGCAAAAACCAAGCAAAGCTAGGTTCTATCTAGACGATACTGTGGATGTGATGATGTTGCTTCAGGTGCTTGCTGCTGCTTCAGAAGGCAGCAGCTA 2531 0.4014 MMARSCMNLLDLVSGDILNFPPSPRALPRVMTVPGIISDVDGKEHSGDDLSDPSLEYSQKIIVVANNLPLNAQKDQNSGRWCFSYDEDSIFLQLKDGLPSKTKVVYVGSLDVDVDASEQENVSLELLQKFSCVPTFLPSELQKQFYDGFCKQILWTLFHYMLPLYPDHCNRFDRSLWQAYVSANKIFADKVREVIDPECDYVWIHDYHLMVLPTFLRRRYIRVKLGFFLHSPFPSSEIYRSLPVRDEILKSLLNVDLIGFHTFDYARHFLSCCSRMLGLEYESKRGYIGLEYFGRTVYIKIWPVGIHMSKLQSALDHPSSSVKGREIYEQFRGKKLILGVDDMDIFQGISLKLLALEKLLEQHSYLRGELILVQIVNPSRSTGKDVEETKKEIHITAKRINERFGTPGYEPVIIIDHPLPFHEKTAYYALADCCIVNAVRDGMNLIPYKYIVCRQGSPKMDEALEIASESPRTSALVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMYLAIRMPSEEKHLRHEKHYRYVSSHDVAYWARSFMQDLERASKDHYSKRCWGIGFGMSFRVLFLSPSFRKLSMDHIVSAYKRTNQRAIFLDYDGTIVPKNSIVKSPSPEVISVLNNLCSDTKNTVFIVSGRGKTSLGEWFHECKDLGIAAEHGYLIRWGKQSSWESSPVNTDLGWKMITEPVMRHYTEATDGSYIEAKESALVWHYYDAAHDFGTWQAIELLDHLENVLANEPVIVKKGQYIVEVKPQGITKGLVTEQVLSTLTNNGKTPDFVLCIGDDRSDEDMFESISTKTFTSPTEIFACTVGQKPSKARFYLDDTVDVMMLLQVLAAASEGSS 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00383 843 CDD GT20_TPS 60 545 IPR001830 GO:0003824|GO:0005992
Bva05g00383 843 Gene3D - 717 843 IPR023214 -
Bva05g00383 843 Gene3D - 591 706 IPR023214 -
Bva05g00383 843 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 840 IPR001830 GO:0003824|GO:0005992
Bva05g00383 843 Gene3D Glycogen Phosphorylase B; 321 530 - -
Bva05g00383 843 CDD HAD_TPP 593 830 - -
Bva05g00383 843 SUPERFAMILY HAD-like 592 836 IPR036412 -
Bva05g00383 843 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 593 794 IPR006379 -
Bva05g00383 843 TIGRFAM T6PP: trehalose-phosphatase 590 836 IPR003337 GO:0003824|GO:0005992
Bva05g00383 843 Pfam Trehalose-phosphatase 595 824 IPR003337 GO:0003824|GO:0005992
Bva05g00383 843 Gene3D Glycogen Phosphorylase B; 48 320 - -
Bva05g00383 843 Pfam Glycosyltransferase family 20 60 545 IPR001830 GO:0003824|GO:0005992
Bva05g00383 843 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 1 840 - -
Bva05g00383 843 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00383 Bva-Chr5 1899922 1905695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00383 1 842 Trehalose Biosynthesis Gene Families AT1G23870 67.967 0.0 1230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00383 K16055 - tcc:18603871 1320.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00383 05 1899922 1905695 Bva06g01331 06 9978780 9984847 BWGD
Bva06g01331 06 9978780 9984847 Bva05g00383 05 1899922 1905695 ECH
Bva05g00383 05 1899922 1905695 Bva05g00383 05 1899922 1905695 ECH