Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00380 ATGGCTACAAGCAGACTTACTTCGATGGCTACTCGCACTTTGTCTgtctctcctttttcttcttgctttgCTTCACTCCTTCGTTCACTAGGAAGAGACTGTGGCAGGTGGAGAAGCATCAAGAGATTTAGCACAGCTGCGGAAACTGACGAATTAATCACACCACCATTCCAAATAAGGTGTACCCAGCATCTAATTAATGGGCAATTTGTGGATGCTGCATCAGGAAAAACTTTCCCAGCATATGACCCACGCACTGGGGATGTGATTGCTCGTGTTGCTGAAGGTGACCACGAGGATATTGACCGTGCAGTATCTGCAGCTCGCAAGGCCTTTGATGAGGGACCATGGCCTAAGATGACCCCTTATGAAAGATCACGGATGATGCTGCGTTTTGCTGATTTGGTTGAGAAACACAGTGATGAGCTTGCAGCTCTGGAAACTTGGAATAGCGGAAAGCCCTACGAACAAGCTGCCAATGTTGAATTACCAATGTTTGTACGTCTGTTTCACTACTATGCTGGTTGGGCGGATAAAATTCATGGGCTGACAGTGCAAGCAGATGGGAATTACCATGCACAAACACTGCATGAACCAATTGGCGTTGCAGGACAAATCATACCATGGAACTTTCCTCTCTTCTTGTTTGCTTGGAAAGTTGGCCCTGCCTTGGCATGTGGTAATACTGTTGTTGTCAAGAGCGCGGAGCAAACTCCTTTGACTGCTCTCCTTGCAGCCGAGCTATTTCATGAGGCCGGTCTTCCCCCAGGGGTTCTAAATGTGGTGTCTGGTTATGGTCCATCTGCTGGTTCAGCTCTTGCAAGTCATTTGGATGTGGACAAGATAGCTTTCACAGGATCGACTGGCACTGGAAAGATTATATATGAATTGGCTGCAAAGAGCAATCTTAAGCCTGTGACATTGGAGCTTGGTGGAAAATCACCTTTCATAGTGTGTGAAGACGCTGACGTAGACAAAGCTGTGGAACTTGCACACTCGGCTCTCTTCTTTAATCAGGGTCAATGTTGTTGCGCCGGGTCTCGTACTTATGTGCAGGAGAGAGTGTACGATGAGTTCCTGGAGAAAGCAAAGGCAATTGCTTTGAAGCGCGTAGTTGGTGATCCCTTCAAGAAAGGTGTAGAGCAAGGTCCTCAGATCGATAGCGAACAATTCGAGAAAATCCTCAAGTATATCAAGTCAGGTATTGAAAGCAATGCTACTCTGGAATGTGGAGGCGAGAGAATTGGCAGCAGGGGCTTCTTTGTCCAGCCAACGGTCTTCTCAAACGTTGAGGATAATATGTTGATAGCGAAAGACGAGATCTTTGGCCCAGTTCAAACCATCTTGAAATTCAAGAATACGAATGAAGTTATAAAAAGGGCAAACACAACACGTTATGGCCTTGCTGCGGGCGTGTTCACTAACGAGTTGGACACGGCAAACACCTTGATGCGGGGACTCAGGGCCGGAACTGTATGGATAAACTGCTTTAATGTGTTTGATGCTGCAATTCCCTTTGGCGGCTACAAAATGAGCGGCGTAGGCAGAGAGAAGGGCATCTATGGCCTTCAAAATTATCTGCAGGTCAAGGCTGTGGTTACACCTCTCAACAATCCTGCATGGTTGTA 1628 0.4625 MATSRLTSMATRTLSVSPFSSCFASLLRSLGRDCGRWRSIKRFSTAAETDELITPPFQIRCTQHLINGQFVDAASGKTFPAYDPRTGDVIARVAEGDHEDIDRAVSAARKAFDEGPWPKMTPYERSRMMLRFADLVEKHSDELAALETWNSGKPYEQAANVELPMFVRLFHYYAGWADKIHGLTVQADGNYHAQTLHEPIGVAGQIIPWNFPLFLFAWKVGPALACGNTVVVKSAEQTPLTALLAAELFHEAGLPPGVLNVVSGYGPSAGSALASHLDVDKIAFTGSTGTGKIIYELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHSALFFNQGQCCCAGSRTYVQERVYDEFLEKAKAIALKRVVGDPFKKGVEQGPQIDSEQFEKILKYIKSGIESNATLECGGERIGSRGFFVQPTVFSNVEDNMLIAKDEIFGPVQTILKFKNTNEVIKRANTTRYGLAAGVFTNELDTANTLMRGLRAGTVWINCFNVFDAAIPFGGYKMSGVGREKGIYGLQNYLQVKAVVTPLNNPAWL 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00380 542 Pfam Aldehyde dehydrogenase family 70 532 IPR015590 GO:0016491
Bva05g00380 542 CDD ALDH_F2BC 62 534 - -
Bva05g00380 542 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 312 501 IPR016163 GO:0016620
Bva05g00380 542 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 28 542 - -
Bva05g00380 542 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 308 315 IPR029510 GO:0016491
Bva05g00380 542 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 336 347 IPR016160 GO:0016491
Bva05g00380 542 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 66 530 IPR016162 GO:0016491
Bva05g00380 542 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 28 542 - -
Bva05g00380 542 SUPERFAMILY ALDH-like 57 537 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00380 Bva-Chr5 1882792 1885809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00380 1 542 Aldehyde Dehydrogenase Gene Family AT3G48000 73.849 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00380 K00128 - tcc:18603880 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00380 05 1882792 1885809 Bva05g00380 05 1882792 1885809 ECH