Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00376 ATGAAGGACGGCGGTGATGGGTTTGTCAGGGCCGATCAGATTGATCTCAAGACCATCGATGAACAGCTCGAGAGGCATCTCAACAAAGTATTGGTTATGGAGAAGAATAAGAGGAAAGAGGAAGATGCTAATACTATCACTGCTTCTCCCATTAAAATTACTGGTAGTGCTGCCGCTACCTTCAATAAGCAAACGCAGGAGTGGGAAATTGACCCTTCCAAGCTAATTGTCAAGAGTGTTATAGCTCGTGGCACTTTCGGCACTGTTCACCGCGGTGTCTATGATGCCCAAGATGTCGCTGTTAAATTGCTGGACTGGGGTGAAGAGGGCCACAGGACGGAAGGTGAAATTGCTTCACTGAGGTCAGCATTTATACAAGAAGTAGCTGTTTGGCAAAAACTGAATCATCCCAATGTTACTAAGTTTATAGGGGCAATAATGGGGTCGACAGAACTTCAGGTACAAACAGATAGTGGTCTGATTAGCATGCCAAGCAGTGTCTGTTGTGTTGTTGTGGAGTATCTCGCTGGTGGTTCCCTGAAATCTTACCTGATAAAAAACAGGAGAAGGAAGTTAGCATTTAAGGTTGTCATCCAGCTGGCACTTGATCTTGCAAGAGgGCTAAGTTATCTTCACTCTCAGAAAATTGTCCACAGAGATGTAAAAACAGAGAATATGTTGTTGGATAAGAGTCGTACAGTTAAAATTGCTGACTTTGGGGTAGCACGTGTTGAGGCTTCAAATCCCAATGACATGACTGGGGAGACCGGTACTCTTGGTTACATGGCTCCAGAGGTTTTAAATGGCAACCCCTATAACAGGAAGTGTGATGTGTACAGTTTGGGCATCTGTTTATGGGAGATATATTGTTGTGACATGCCATATCCTGACTTAAGTTTCGCAGAGATTACTTCAGCAGTTGTTCGCCAGAACCTGAGACCAGATATACCAAGATGTTGCCCAAGTTCTCTAGCAAACGTAATGAAGAGGTGTTGGGATGCCAATCCTGATAAACGACCAGAGATGGACGAGGTAGTTTCTATGTTAGAGGCTATTGACACATCAAAAGGTGGAGGTATGATCCCCGTCGATGAAGCTCAGGGCTGTCTTTGCTTCCGCAAGTACAAAGGGCCTTA 1136 0.4463 MKDGGDGFVRADQIDLKTIDEQLERHLNKVLVMEKNKRKEEDANTITASPIKITGSAAATFNKQTQEWEIDPSKLIVKSVIARGTFGTVHRGVYDAQDVAVKLLDWGEEGHRTEGEIASLRSAFIQEVAVWQKLNHPNVTKFIGAIMGSTELQVQTDSGLISMPSSVCCVVVEYLAGGSLKSYLIKNRRRKLAFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKSRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSLGICLWEIYCCDMPYPDLSFAEITSAVVRQNLRPDIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPVDEAQGCLCFRKYKGP 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00376 378 PRINTS Tyrosine kinase catalytic domain signature 320 342 IPR001245 GO:0004672|GO:0006468
Bva05g00376 378 PRINTS Tyrosine kinase catalytic domain signature 276 298 IPR001245 GO:0004672|GO:0006468
Bva05g00376 378 PRINTS Tyrosine kinase catalytic domain signature 172 185 IPR001245 GO:0004672|GO:0006468
Bva05g00376 378 PRINTS Tyrosine kinase catalytic domain signature 210 228 IPR001245 GO:0004672|GO:0006468
Bva05g00376 378 CDD STKc_MAP3K-like 81 349 - -
Bva05g00376 378 SMART serkin_6 75 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00376 378 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 372 - -
Bva05g00376 378 Gene3D Phosphorylase Kinase; domain 1 63 158 - -
Bva05g00376 378 Gene3D Transferase(Phosphotransferase) domain 1 176 364 - -
Bva05g00376 378 ProSiteProfiles Protein kinase domain profile. 75 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00376 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Bva05g00376 378 SUPERFAMILY Protein kinase-like (PK-like) 60 349 IPR011009 -
Bva05g00376 378 Pfam Protein tyrosine and serine/threonine kinase 77 349 IPR001245 GO:0004672|GO:0006468
Bva05g00376 378 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00376 Bva-Chr5 1870762 1874208 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00376 1 310 MAP Kinase Kinase Kinase AT5G50000 77.603 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bva05g00376 PK_Tyr_Ser-Thr 1.3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00376 - - csv:101209182 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01340 06 10008204 10012188 Bva05g00376 05 1870762 1874208 ECH
Bva05g00376 05 1870762 1874208 Bva05g00376 05 1870762 1874208 ECH