Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00372 ATGAAGAATTTTTACTGGTTACAATTACAAATTTCTAACAGCGGCAGGTCAGGTAGAAGGCTATCCCTCGGGGAATACAAGAGGGCCGTGTCATGGTCCAAGTATTTGGTCTCATCCGGGGCTGCCATAAAGGGGGAAGGAGAAGAATGGAGCGCTGATATGTCTCTGTTATATATTGGTTCCAAATTTGCTTCTGGTAGACACAGCAGGATTTACAGAGGCATCTATAAGCAGAGCGATGTCGCCATTAAGCTTATAAGTCAACCAGAAGAAGATGAGGACTTAGCTGTTCAGCTTGAGAAGCAATTCAATTCAGAGGTCGCTTTGCTCTTTCCATTGCGGCATCCAAATATTATTGCTTTTGTTGCAGCTTGCAAGAAAACTCCTGTGTTTTGTATAATTACTGAATATTTGGCCGGAGGTTCATTGAGAAAATACCTGCAACATCAAGAACCACATTCAGTTCCGCATAAACTTGTTCTGAAATTAGCCCTAGACATTGCAAGGGGGATGCAGTTTCTTCATTCTCAGGGGATACTTCATAGGGATCTGAAGTCAGAAAATCTACTGCTGGGGGAAGATATGTGTGTAAAAGTAGCAGATTTTGGAATCTCGTGCTTAGAATCTCAGTGCAGTAGTGACAGTGCCAAAGGATTCACTGGAACTTACCGTTGGATGGCACCTGAAATGATCAAAGAAAAGCATCACACCAAGAAGGTGGATATCTACAGTTTCGCAATAGTCCTATGGGAGCTTCTAACAGCGCAGACACCATTTGATAACATGACGCCAGAGCAGGCTGCATTTGCGGCCACCCACAAGAATGCAAGGCCACCGTTGCCACCAGAATGTCCATGGGCATTTAGTCACCTCATCAACAGATGCTGGTCAAGCAATCCAGATAAAAGGCCACATTTTGATGAGATAGTTTTCATTTTGGAGAGCTATTCGGAATCCCTTGAGGAAGATCCAGATTTTTTCTCAACTTACAAACCACATCGCACTAGTGCTATTCTCGGATGCTTTTCAAAATGTATCTCGTTTCATGCCAGCAAATGCAAAGCTTA 1067 0.433 MKNFYWLQLQISNSGRSGRRLSLGEYKRAVSWSKYLVSSGAAIKGEGEEWSADMSLLYIGSKFASGRHSRIYRGIYKQSDVAIKLISQPEEDEDLAVQLEKQFNSEVALLFPLRHPNIIAFVAACKKTPVFCIITEYLAGGSLRKYLQHQEPHSVPHKLVLKLALDIARGMQFLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQCSSDSAKGFTGTYRWMAPEMIKEKHHTKKVDIYSFAIVLWELLTAQTPFDNMTPEQAAFAATHKNARPPLPPECPWAFSHLINRCWSSNPDKRPHFDEIVFILESYSESLEEDPDFFSTYKPHRTSAILGCFSKCISFHASKCKA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00372 355 CDD STKc_MAP3K-like 64 313 - -
Bva05g00372 355 Pfam Protein tyrosine and serine/threonine kinase 59 311 IPR001245 GO:0004672|GO:0006468
Bva05g00372 355 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 1 335 - -
Bva05g00372 355 SMART serkin_6 57 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00372 355 Gene3D Phosphorylase Kinase; domain 1 46 138 - -
Bva05g00372 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Bva05g00372 355 Gene3D Transferase(Phosphotransferase) domain 1 140 336 - -
Bva05g00372 355 PRINTS Tyrosine kinase catalytic domain signature 240 262 IPR001245 GO:0004672|GO:0006468
Bva05g00372 355 PRINTS Tyrosine kinase catalytic domain signature 284 306 IPR001245 GO:0004672|GO:0006468
Bva05g00372 355 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Bva05g00372 355 PRINTS Tyrosine kinase catalytic domain signature 221 231 IPR001245 GO:0004672|GO:0006468
Bva05g00372 355 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Bva05g00372 355 ProSiteProfiles Protein kinase domain profile. 57 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00372 355 SUPERFAMILY Protein kinase-like (PK-like) 47 311 IPR011009 -
Bva05g00372 355 PANTHER SERINE-THREONINE PROTEIN KINASE 1 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00372 Bva-Chr5 1850854 1853468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00372 31 347 MAP Kinase Kinase Kinase AT1G62400 59.627 3.46e-134 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bva05g00372 PK_Tyr_Ser-Thr 2.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00372 - - rcu:8289015 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01347 06 10043538 10046755 Bva05g00372 05 1850854 1853468 BWGD
Bva05g00372 05 1850854 1853468 Bva05g00372 05 1850854 1853468 ECH