Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00363 ATGGATCTTGAGACAAAGCTCAGAGAAAACTATGTCTTACAGTCACAGCCAATGCATTTGCAAGAACATTTCTTGAAAGCTAACATGAGAGACGAGCTTCCTTTTGGGGTTCCCTCATCTCAGGGTTTCTTGCAAGATTTTCACCATATTGATCATCAATTTCATGTAAATGGGTCTTCATCAAACCCACCTTTCGGGGTGCAAACTCCGAGTTTTGATCCTTCTGATACTTTCAACTATGGCTGTTCTTCTGCAGATTTTGATGTTTATGAGTGCAAACcctttgttgaaaataatgGCACTGGCCATGCTCAAGTCATGGACAATTTCCAATATGGAAATCATGGCTTGAACCTTCCTCAGAGGAATAATCAAGTGGATATGTTGGGTGGAAACCAAACCTGTGTGCCCTTTAATTCTCAAGAAATTATCAAACCCATGAATTTTGTTATACCAGATGAAGTCTCATGCATAACACCAgcaaattattacaaaaaagtTGGCTTGAACAAGAATAATAGAGCATCTTCTACAATTGCTAGAAGGACATACAAAGTCCGGAACAAGTCCAGCATAGTGAAAGGACAGTGGACGGCTGATGAAGATAGGTTGTTGATTCAGCTTGTTGACCAATATGGAGTGAGGAAGTGGTCTCATATTGCTCAAATGTTGCCTGGAAGAATAGGCAAACAGTGTAGAGAGCGATGGCATAACCATCTAAGGCCTGACATTAAgAAGGATTCATGGACCGATGAAGAGGATAAAATACTTATCCAAGCCCATGCAGAGATAGGAAATAAATGGGCAGAGATTGCCAAAATGTTGCCTGGGAGAACTGAGAATTCAATCAAAAACCATTGGAATGCAACCAAGAGAAGGCAATATTCCAAGAGAAAATGTCGCTCAAAGTATCCTAGAGGCTCTCTTCTGCAGGAATATATCAAGAGCTTGAACTTAGACCAAAACCCACCAATAGACTACAGGAAAAAATCTTCTGCCAAAACTGGCACAAGCaaaacagcagcagcaactcAACCCCAAATTGCAGACGATGACCGATTGGTACCAAATTATGATTTCAACTATGTCCCGGATTTTTGCTTGgatgaaaatttgtttcaaGAGGGATGTAGCATTGATTCTCTACTGGATAACATGCCTTGTGCTCCTACTATGGACCATGAAAAAGACTTCGGAGGAGCAAAAATGCCTCTTGTTAATGTCGATGAGCATCATTTTGAGAGGGACATGGCACAAGATGTGGCACCAACATTGGGTGGTGTTCAAGTTAAGAAGGAGCTCGATTTGGTCGAGATGATGTCTCAGGTCAATGAAGTGGTTAATATCTA 1349 0.3914 MDLETKLRENYVLQSQPMHLQEHFLKANMRDELPFGVPSSQGFLQDFHHIDHQFHVNGSSSNPPFGVQTPSFDPSDTFNYGCSSADFDVYECKPFVENNGTGHAQVMDNFQYGNHGLNLPQRNNQVDMLGGNQTCVPFNSQEIIKPMNFVIPDEVSCITPANYYKKVGLNKNNRASSTIARRTYKVRNKSSIVKGQWTADEDRLLIQLVDQYGVRKWSHIAQMLPGRIGKQCRERWHNHLRPDIKKDSWTDEEDKILIQAHAEIGNKWAEIAKMLPGRTENSIKNHWNATKRRQYSKRKCRSKYPRGSLLQEYIKSLNLDQNPPIDYRKKSSAKTGTSKTAAATQPQIADDDRLVPNYDFNYVPDFCLDENLFQEGCSIDSLLDNMPCAPTMDHEKDFGGAKMPLVNVDEHHFERDMAQDVAPTLGGVQVKKELDLVEMMSQVNEVVNI 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00363 449 SMART sant 245 293 IPR001005 -
Bva05g00363 449 SMART sant 193 242 IPR001005 -
Bva05g00363 449 Pfam Myb-like DNA-binding domain 197 254 - -
Bva05g00363 449 Gene3D - 247 299 - -
Bva05g00363 449 PANTHER BNAC03G62830D PROTEIN 110 377 - -
Bva05g00363 449 CDD SANT 248 291 IPR001005 -
Bva05g00363 449 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 245 295 IPR017930 -
Bva05g00363 449 SUPERFAMILY Homeodomain-like 192 287 IPR009057 -
Bva05g00363 449 MobiDBLite consensus disorder prediction 324 345 - -
Bva05g00363 449 ProSiteProfiles Myb-like domain profile. 241 291 IPR001005 -
Bva05g00363 449 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 189 244 IPR017930 -
Bva05g00363 449 CDD SANT 197 240 IPR001005 -
Bva05g00363 449 Gene3D - 186 246 - -
Bva05g00363 449 ProSiteProfiles Myb-like domain profile. 189 240 IPR001005 -
Bva05g00363 449 PANTHER MYB PROTEIN-RELATED 110 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00363 Bva-Chr5 1796145 1797691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00363 63 387 MYB Transcription Factor Family AT4G18770 50.284 3.17e-100 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva05g00363 Myb_DNA-bind_6 6.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00363 K09422 - gmx:100816653 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00363 05 1796145 1797691 Bva06g01363 06 10160103 10161721 BWGD
Bva06g01363 06 10160103 10161721 Bva05g00363 05 1796145 1797691 ECH
Bva05g00363 05 1796145 1797691 Bva05g00363 05 1796145 1797691 ECH