Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00362 ATGCAGAGCAcggttttctctctctccccttcGCTTCCTCTTTGCAGAACTCGCAAACCTGCCTCCTCCCTTCGCTTCGATCCCATTCGTATCTCTGCTTCCTCTTCCAAACCAACTGAAAGCTTCAATGTCGCATGCTCATCCTCTTTCGCTCGTCGATCCTGGTCTTTTTCTCCTTCGTCCTCTTTTAAATTCAGGCCTTGGACATCCGTCTCCTCCCTTGCTCCCTCAGATCCTGATGCGAGTCGTTTTGAGGCCAAGGCTAGTTCGGTACCGGAGAGTGCCGATGACAGCTCCGGTAGCTTATCCAAAACACTCGTACTTGGGTCCTTGTTTGGACTCTGGTACCTGTTCAATATCTACTTCAATATCTACAACAAACAGGTTCTGAAGGCGTATCATTTCCCTTTAACCATCACTACAGTTCAGTTTACTGTTGGGACTGTACTTGTATTGCTTATGTGGGGTTTAAATCTTCACAAAAGGCCTAAGATCAGTGGCGCCCAGCTTGCAGCAATATTGCCTCTGGCTGTGGTACACACTTGTGGGAACCTTTTCACCAATATGAGTCTTGGAAAGGTGGCAGTGTCATTCACCCACACGATCAAAGCAATGGAGCCCTTCTTTTCAGTGATTCTTTCTGCTATGTTCCTTGGAGAGCCGCCTACTGGATGGGTGCTTGCTTCCCTTGTTCCTATTGTTGGTGGGGTGGCACTGGCATCAGTTACGGAAGCTTCCTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATTTGACATTTCAGTCTCGTAATGTTCTTAGCAAAAAGGTCATGGTTAAAAAAGAGgACTCTATGGACAACATAACCCTCTTCTCAATAATAACAGTTATGTCCTTCTTGTTGTTAGCGCCTGTAGCCTTATTCGTGGAGGGTGTCAAATTTACACCTGCATACCTGCAATCTGCTGGTTTAAATGTTAGACAACTGTACACCAGGTCTCTTATTGCAGCACTCTGTTTCCACGCATATCAGCAGGTTTCTTATATGATATTGCAGAGGGTATCACCTGTTACCCATTCCGTGGGCAACTGTGTGAAGCGGGTTGTGGTCATTGTGAGCTCTGTGATCTTCTTCCAGACACCTGTATCACCTGTTAATGCTCTTGGAACTGCGGTGGCTCTTGCTGGGGTTTTCCTCTATTCAAGGGTGAAGCGAATTAAGCCAAAGCCAAAGACAGCTTA 1226 0.456 MQSTVFSLSPSLPLCRTRKPASSLRFDPIRISASSSKPTESFNVACSSSFARRSWSFSPSSSFKFRPWTSVSSLAPSDPDASRFEAKASSVPESADDSSGSLSKTLVLGSLFGLWYLFNIYFNIYNKQVLKAYHFPLTITTVQFTVGTVLVLLMWGLNLHKRPKISGAQLAAILPLAVVHTCGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGEPPTGWVLASLVPIVGGVALASVTEASFNWAGFWSAMASNLTFQSRNVLSKKVMVKKEDSMDNITLFSIITVMSFLLLAPVALFVEGVKFTPAYLQSAGLNVRQLYTRSLIAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNALGTAVALAGVFLYSRVKRIKPKPKTA 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00362 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 151 242 - -
Bva05g00362 408 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 26 382 - -
Bva05g00362 408 Pfam Triose-phosphate Transporter family 107 396 IPR004853 -
Bva05g00362 408 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 106 406 IPR004696 GO:0016021|GO:0022857|GO:0055085
Bva05g00362 408 PANTHER SOLUTE CARRIER FAMILY 35 26 382 - -
Bva05g00362 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 302 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00362 Bva-Chr5 1790973 1795214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00362 1 408 Antiporters AT5G33320 73.723 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00362 K15283 - csv:101203848 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00362 05 1790973 1795214 Bva06g01369 06 10180248 10184602 BWGD
Bva06g01364 06 10163179 10166957 Bva05g00362 05 1790973 1795214 ECH
Bva05g00362 05 1790973 1795214 Bva05g00362 05 1790973 1795214 ECH