Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00332 ATGGAATTgctcctcttcctcttcctcttcctctttcaaCCTTTTATCTCTCCAATTTTTGCCGTTGACTTCCTCTACAATTCCTTCAATGGTCTCACGAACGGCACCAATGTTACCCTCATCAACGATGCCCGTTTTGACAACTCTGTAATTCGGATGACCAACGACTCAAACCAGTACTCCTTTGGACGAGCTTTCTATCCCACCATGATTAGAATGAAACCCAGCTCCAATTCCACTAACATTTCTTCGTTTTCCACTTCTTTCGTCTTCTCCATCTTGCCACAGGTTTCTACGAGTCCCGGATTTGGTCTTGCCTTTGTACTATCAAACACAACCTCTCCTCCTGGGGCGCTTGCTAGCCAATACTTTGGTCTTTTCACAAACGCAACTGTTCCCGCCGTTGCTCCCTTATTAGCCGTCGAATTCGATACTGGGCAGAACCCAGAGTTCAATGACCCCGATGATAATCACATCGGAATCGATTTGAATAACATCGTATCCGCAAAAGTACAATCCGCTGGTTACTATAATTCTAGTGGCGGTTTTGTGCCTGTTCGCATGCGCAATGGTCAAAATATCCGAGCTTGGATCGAATTCAATGGCACGAATTTGGAGATTAACGTTACAATTGCGCCGGTCGGTGTGTCTCGCCCGACAAGGCCTACTCTTACGTACAGAGATGCAGTTATAGCTAATTATGTGTCTGCCGAGATGTATGTTGGGTTTTCTGCTTCGAAGACCAATTGGGTTGAAGCTCAGAGAGTACTATCATGGAGTTTGAGCGATACACGGACTGCGAGAGACATAAATACAACAAATTTACCAGTTTTTAAGCCGGAATCATCCTCGTCGTCACTTTCAGCTGGGGCAATTGCTGGGATTGTAATTGCTTGTGTTGTTTTTGTGGTAATTTGTGCATCTGGATATTTCTTGTGGTGGCGACACAAAAAGTTGAAAGAGGAGGAAGATGAAATTGAGGAGTGGGAGCTGGAGTATTGGCCTCACAGATTCTCTTACGCGGAGCTCAACGTGACCACTGGTGAATTCAGCAAGGATCGACTCCTGGGTTCAGGAGGATTTGGAAGAGTTTATAAAGGAACTTTACCGAACAACACTGAAGTTGCAGTTAAATGCGTAAACCACGATTCAAATCAGGGGCTAAGAGAATTTATGGCCGAAATTTCCAGTATGGGCAGACTCCAGCACAAAAATTTGGTTCAAATGCGAGGATGGTGCAGAAAAGGCAACGAGCTTATGCTTGTCTATGACTGTATGCCCAATGGAAGCCTCAATAAATGGATTTTTGACCAACCAAAGAAGCTGTTAGGTTGGGAACATCGCCGGCGAGTCCTCATCGATGTTGCAGAGGGACTAAACTATCTCCACCATGGTTGGGACCAAGTTGTAATTCACAGAGACATTAAATCAAGTAACATATTGTTGGACTCTGATATGAGGGGTCGGCTCGGAGATTTTGGTCTTGCTAAGCTTTACCAACACGGGGAAATTCCGAACACCACCCGTGTGGTGGGTACGCTGGGCTATTTAGCACCAGAGCTTGCAACAGTTGCTGCGCCAACATCAGCAAGTGATGTGTACAGCTTCGGAGTAGTGTTGTTAGAAGTTGCCTGTGGTCGGAGACCGATAGAAACAACGGCACCGGAGGAGGAAGTGGTTTTGATTGATTGGGTAAGGGAATTGTATGCCAAAGGGAATGCTGTCGAGGCTGCGGATCCTAGGATTAAGGGTGAGTACGATGTGGGAGAGATGGAAATGGTGTTGAAGCTTGGTTTGGCTTGTTGTCACCCCGACCCACAAAGGAGACCAACCATGAAAGAAGTGATTGCGCTTATGGTGGGCGAGGAAGTAGCAACAGCCCCATCGGATTTGTTGTCGGAATTGGCTCGCGGTGATAGTGATGTCGTGCTCGGTGGCGGCGGCGACGATGATTTGGGAAAGGCGACGCCTTCACAAGCCACGCCTCCGGTCCGGCTAGAGTG 2003 0.4638 MELLLFLFLFLFQPFISPIFAVDFLYNSFNGLTNGTNVTLINDARFDNSVIRMTNDSNQYSFGRAFYPTMIRMKPSSNSTNISSFSTSFVFSILPQVSTSPGFGLAFVLSNTTSPPGALASQYFGLFTNATVPAVAPLLAVEFDTGQNPEFNDPDDNHIGIDLNNIVSAKVQSAGYYNSSGGFVPVRMRNGQNIRAWIEFNGTNLEINVTIAPVGVSRPTRPTLTYRDAVIANYVSAEMYVGFSASKTNWVEAQRVLSWSLSDTRTARDINTTNLPVFKPESSSSSLSAGAIAGIVIACVVFVVICASGYFLWWRHKKLKEEEDEIEEWELEYWPHRFSYAELNVTTGEFSKDRLLGSGGFGRVYKGTLPNNTEVAVKCVNHDSNQGLREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDCMPNGSLNKWIFDQPKKLLGWEHRRRVLIDVAEGLNYLHHGWDQVVIHRDIKSSNILLDSDMRGRLGDFGLAKLYQHGEIPNTTRVVGTLGYLAPELATVAAPTSASDVYSFGVVLLEVACGRRPIETTAPEEEVVLIDWVRELYAKGNAVEAADPRIKGEYDVGEMEMVLKLGLACCHPDPQRRPTMKEVIALMVGEEVATAPSDLLSELARGDSDVVLGGGGDDDLGKATPSQATPPVRLE 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00332 667 MobiDBLite consensus disorder prediction 639 667 - -
Bva05g00332 667 CDD STKc_IRAK 356 619 - -
Bva05g00332 667 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 6 641 - -
Bva05g00332 667 CDD lectin_legume_LecRK_Arcelin_ConA 22 262 IPR001220 GO:0030246
Bva05g00332 667 SMART serkin_6 350 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00332 667 Pfam Legume lectin domain 22 275 IPR001220 GO:0030246
Bva05g00332 667 SUPERFAMILY Protein kinase-like (PK-like) 331 617 IPR011009 -
Bva05g00332 667 ProSitePatterns Legume lectins beta-chain signature. 139 145 IPR019825 -
Bva05g00332 667 Gene3D Transferase(Phosphotransferase) domain 1 426 629 - -
Bva05g00332 667 Gene3D Phosphorylase Kinase; domain 1 319 424 - -
Bva05g00332 667 ProSiteProfiles Protein kinase domain profile. 350 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00332 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 7 266 IPR013320 -
Bva05g00332 667 Gene3D - 20 280 - -
Bva05g00332 667 PANTHER - 6 641 - -
Bva05g00332 667 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Bva05g00332 667 Pfam Protein kinase domain 351 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00332 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00332 Bva-Chr5 1612715 1615170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00332 21 635 Receptor kinase-like Gene Family AT1G15530 69.790 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bva05g00332 Pkinase 1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00332 - - jre:108985873 1003.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00332 05 1612715 1615170 Bva05g00332 05 1612715 1615170 ECH