Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00331 ATGGAGTCCAGAAAAAGGAGTACGGATAGAAATTCGATCAAGTTCCTCTGTAGCTACGGCGGGAAAATTCTTCCTCGCGTCACCGACGGCAACCTTCGTTACGTTGGTGGCCACACTAGAGTTCTTGCTGTGGCTcgctctatttctttttctgAACTGATTGTGAAGCTTGTTGAGTTCTGTGGTTCATCTGTGACGTTGAGATGTCAGTTGCCCAACGGAGATTTGGAGACCTTGATTTCGATAACCAATGATGAAGATTTGGCGAATATTGTTGAGGAATATGATCGGGCTTCGTCGTCGTTAATTCACCCGTTAAAGATTAGAGCCATTCTTTCGCCGCCGAAGTCTCTAAAGAAAGTATCTCCTACTTCGTCTACTGCATCGAGCGTCAATTTCTCCCGTTCGTCTGGATCGTCGCGTACCTCCATCGAATCTTTGCCTAATTCCATGGCGCATCGCTTCGTACGTCATATTTGTTCGTCGCCGGCGATATATCCAATCGGTGTCCGTAATGGCTCAGGAAAAGTCCGTTGCTGTACGGGTCACTTAGACGGAAGTCCAAGGCTTTTGTATCGCCGATGCCATTGCAACGATTACTGCCACTG 608 0.4638 MESRKRSTDRNSIKFLCSYGGKILPRVTDGNLRYVGGHTRVLAVARSISFSELIVKLVEFCGSSVTLRCQLPNGDLETLISITNDEDLANIVEEYDRASSSLIHPLKIRAILSPPKSLKKVSPTSSTASSVNFSRSSGSSRTSIESLPNSMAHRFVRHICSSPAIYPIGVRNGSGKVRCCTGHLDGSPRLLYRRCHCNDYCH 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00331 202 CDD PB1_UP2 16 112 - -
Bva05g00331 202 SMART PB1_new 27 115 IPR000270 GO:0005515
Bva05g00331 202 Pfam PB1 domain 29 100 IPR000270 GO:0005515
Bva05g00331 202 SUPERFAMILY CAD & PB1 domains 29 120 - -
Bva05g00331 202 Gene3D - 33 111 - -
Bva05g00331 202 MobiDBLite consensus disorder prediction 119 145 - -
Bva05g00331 202 PANTHER PB1 DOMAIN PROTEIN 10 202 - -
Bva05g00331 202 PANTHER OS05G0427100 PROTEIN-RELATED 10 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00331 Bva-Chr5 1606166 1608181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00331 1 94 MAP Kinase Kinase Kinase AT2G35050 46.809 4.17e-24 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00331 - - gmx:100810563 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00331 05 1606166 1608181 Bva05g00331 05 1606166 1608181 ECH