Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00327 ATGGAATCTGGAGCTAGGTTCTACTCTGTCGATGAGTTCAGATTGGATGCAAAATGGTTAATTGATCCTAAACATCTATTTGTTGGGCCAAGGATCGGAGAGGGAGCTCATGCCAAAGTGTACGAGGGAAAATATAAAAACCAGACGGTTGCTATAAAAATTGTACATAAAGGAGAAACTACAGAAGAAATCGTCAAGGGAGAAGCCCGATTTGCGAGGGAAGTGGCAATGTTGTCCAGAGTTCAACATaagaacttagttaagTTTATTGGTGCTTGCAAGGAGCCTGTAATGGTGATAGTCACTGAGCTCTTACTGGGAGGAACATTGCGCAAGTATTTGCTGAACATGCGGCCGAAATGCTTGGACAGACATGTTGCCATAGGTTTTGCCCTTGATATTGCTCGTGCTATGGAGTGTTTACATTCTCATGGGATCATCCATCGTGATCTGAAACCCGAAAACTTGCTTTTGACTGAAGACCAGAAGACTGTCAAGCTGGCAGATTTTGGGTTAGCAAGAGAAGAATCACTAACAGAGATGATGACAGCTGAAACAGGAACTTACCGTTGGATGGCTCCAGAGTTGTATAGCACTGTCACACTAAGGCAGGGAGAGAAGAAGCATTACAACCATAAAGTGGATGCTTATAGCTTTGCAATTGTGCTGTGGGAGCTCTTACACAATAAACTACCTTTTGAAGGCATGTCAAATCTCCAGGCAGCATATGCAGCAGCCTTTAAAAATGTAAGGCCCAGTACAGAAAATCTCCCTGAGGAATTGGCTGTAATTCTAACTACTTGCTGGCAAGAGGACCCAAATGCCCGGCCAAACTTCACCCAAATAATCCAGATGCtcttaaattatctttacaCTATTTCTCCTCCTGAACCAGCGATTCCTCCAAGGATATTCACCTCCGAGAACACTGTCTTGCCACCGGAGTCCCCTGGTACAAGCTCTTTGATGGCAAAACGTGGTGACTCAGGGGATACACCCAGAGCACAAGAAGACATAAGGCCTAAAGGTTTTCTTTGCTGCTTCAGTCAGTGTTATTG 1058 0.4348 MESGARFYSVDEFRLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETTEEIVKGEARFAREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPKCLDRHVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDQKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSTENLPEELAVILTTCWQEDPNARPNFTQIIQMLLNYLYTISPPEPAIPPRIFTSENTVLPPESPGTSSLMAKRGDSGDTPRAQEDIRPKGFLCCFSQCY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00327 352 PANTHER SERINE-THREONINE PROTEIN KINASE 1 327 - -
Bva05g00327 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Bva05g00327 352 Gene3D Transferase(Phosphotransferase) domain 1 107 294 - -
Bva05g00327 352 ProSiteProfiles Protein kinase domain profile. 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00327 352 SMART serkin_6 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00327 352 Gene3D Phosphorylase Kinase; domain 1 14 105 - -
Bva05g00327 352 CDD STKc_MAP3K-like 32 286 - -
Bva05g00327 352 MobiDBLite consensus disorder prediction 308 337 - -
Bva05g00327 352 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 1 327 - -
Bva05g00327 352 PRINTS Tyrosine kinase catalytic domain signature 140 158 IPR001245 GO:0004672|GO:0006468
Bva05g00327 352 PRINTS Tyrosine kinase catalytic domain signature 214 236 IPR001245 GO:0004672|GO:0006468
Bva05g00327 352 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672|GO:0006468
Bva05g00327 352 PRINTS Tyrosine kinase catalytic domain signature 102 115 IPR001245 GO:0004672|GO:0006468
Bva05g00327 352 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524
Bva05g00327 352 Pfam Protein tyrosine and serine/threonine kinase 30 286 IPR001245 GO:0004672|GO:0006468
Bva05g00327 352 MobiDBLite consensus disorder prediction 309 326 - -
Bva05g00327 352 SUPERFAMILY Protein kinase-like (PK-like) 18 313 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00327 Bva-Chr5 1589107 1592152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00327 9 352 MAP Kinase Kinase Kinase AT5G50180 80.523 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bva05g00327 PK_Tyr_Ser-Thr 3.4e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00327 - - gmx:100796593 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01420 06 10457655 10461495 Bva05g00327 05 1589107 1592152 ECH
Bva05g00327 05 1589107 1592152 Bva05g00327 05 1589107 1592152 ECH